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Aliases for RPL7AP54 Gene

Aliases for RPL7AP54 Gene

  • Ribosomal Protein L7a Pseudogene 54 2 3
  • RPL7A_22_1161 3

External Ids for RPL7AP54 Gene

Previous GeneCards Identifiers for RPL7AP54 Gene

  • GC11P082347
  • GC11P082669

Summaries for RPL7AP54 Gene

GeneCards Summary for RPL7AP54 Gene

RPL7AP54 (Ribosomal Protein L7a Pseudogene 54) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7AP54 Gene

Genomics for RPL7AP54 Gene

Regulatory Elements for RPL7AP54 Gene

Enhancers for RPL7AP54 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F082955 1 Ensembl ENCODE 0.8 -1.3 -1258 1.5 ELF3 LEF1 ZNF792 ZNF48 ZIC2 ZNF644 RARA ZFHX2 FOXK2 PRDM10 DDIAS RAB30 RAB30-AS1 ENSG00000254698 SNORA70E ENSG00000254522 PRCP RPL7AP54
GH11F082899 1.4 FANTOM5 ENCODE 0.2 -56.4 -56438 3.8 HDGF PKNOX1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF207 DDIAS PRCP PCF11 ENSG00000254551 ENSG00000254676 ANKRD42 RAB30 RPL7AP54
GH11F082919 0.9 Ensembl ENCODE 0.3 -37.0 -36981 1.5 HDGF PKNOX1 MTA2 TRIM22 BMI1 TBX21 ZBTB40 RAD51 IKZF1 TARDBP RAB30 RAB30-AS1 DDIAS RPL7AP54
GH11F082927 0.7 ENCODE 0.3 -29.9 -29930 0.2 CTCF HLF JUN TRIM22 REST RAD21 GATA3 JUND ATF3 ZNF143 DDIAS PRCP RAB30 RAB30-AS1 RPL7AP54
GH11F082906 0.9 Ensembl ENCODE 0.2 -49.6 -49634 2.9 SRF CTCF ZNF654 ESRRA RFX1 TRIM22 BMI1 REST RAD21 RFX5 DDIAS PRCP RAB30 RAB30-AS1 RPL7AP54
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL7AP54 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL7AP54 Gene

Chromosome:
11
Start:
82,957,393 bp from pter
End:
82,958,273 bp from pter
Size:
881 bases
Orientation:
Plus strand

Genomic View for RPL7AP54 Gene

Genes around RPL7AP54 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7AP54 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7AP54 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7AP54 Gene

Proteins for RPL7AP54 Gene

Post-translational modifications for RPL7AP54 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7AP54 Gene

Domains & Families for RPL7AP54 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7AP54 Gene

Function for RPL7AP54 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP54 Gene

Localization for RPL7AP54 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL7AP54 Gene

Pathways & Interactions for RPL7AP54 Gene

SuperPathways for RPL7AP54 Gene

No Data Available

Interacting Proteins for RPL7AP54 Gene

Gene Ontology (GO) - Biological Process for RPL7AP54 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7AP54 Gene

Transcripts for RPL7AP54 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7AP54 Gene

No ASD Table

Relevant External Links for RPL7AP54 Gene

GeneLoc Exon Structure for
RPL7AP54
ECgene alternative splicing isoforms for
RPL7AP54

Expression for RPL7AP54 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL7AP54 Gene:

RPL7AP54
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL7AP54 Gene

Orthologs for RPL7AP54 Gene

No data available for Orthologs and Evolution for RPL7AP54 Gene

Paralogs for RPL7AP54 Gene

No data available for Paralogs for RPL7AP54 Gene

Variants for RPL7AP54 Gene

Relevant External Links for RPL7AP54 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7AP54

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP54 Gene

Disorders for RPL7AP54 Gene

No disorders were found for RPL7AP54 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7AP54 Gene

Publications for RPL7AP54 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL7AP54 Gene

Sources for RPL7AP54 Gene

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