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Aliases for RPL7AP54 Gene

Aliases for RPL7AP54 Gene

  • Ribosomal Protein L7a Pseudogene 54 2 3
  • RPL7A_22_1161 3

External Ids for RPL7AP54 Gene

Previous GeneCards Identifiers for RPL7AP54 Gene

  • GC11P082347
  • GC11P082669

Summaries for RPL7AP54 Gene

GeneCards Summary for RPL7AP54 Gene

RPL7AP54 (Ribosomal Protein L7a Pseudogene 54) is a Pseudogene.

Additional gene information for RPL7AP54 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7AP54 Gene

Genomics for RPL7AP54 Gene

GeneHancer (GH) Regulatory Elements for RPL7AP54 Gene

Promoters and enhancers for RPL7AP54 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I082955 Enhancer 1 Ensembl ENCODE 550.8 -1.3 -1257 1.5 ELF3 LEF1 FOXA2 ZBTB6 ZNF792 ZIC2 ZNF644 KMT2B ZNF48 RARA ENSG00000242279 RPL7AP54 DDIAS RAB30 RAB30-AS1 ENSG00000254698 ENSG00000254522 SNORA70E PRCP
GH11I082899 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.2 -56.4 -56438 3.8 HDGF PKNOX1 CLOCK ARNT ARID4B NEUROD1 SIN3A DMAP1 ZNF2 ZBTB7B DDIAS PRCP PCF11 ENSG00000254676 ENSG00000254551 ANKRD42 RAB30 RPL7AP54
GH11I082919 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 -37.0 -36981 1.5 HDGF PKNOX1 FOXA2 BMI1 ATF7 ETV6 IKZF2 ZNF687 SOX6 NR2F1 RAB30 RAB30-AS1 DDIAS RPL7AP54 PRCP
GH11I082927 Enhancer 0.9 ENCODE dbSUPER 0.3 -29.9 -29929 0.2 CTCF RB1 JUN RAD21 FOSL1 GATA3 ZNF143 SMC3 FOSL2 FOS DDIAS PRCP RAB30 RAB30-AS1 RPL7AP54
GH11I082907 Enhancer 0.8 ENCODE dbSUPER 0.2 -51.0 -51009 0.1 CTCF ZNF654 TRIM22 REST RAD21 RFX5 SMC3 ZNF143 CUX1 RAB30 RAB30-AS1 DDIAS RPL7AP54 PRCP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL7AP54 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL7AP54 Gene

Genomic Locations for RPL7AP54 Gene
chr11:82,957,393-82,958,273
(GRCh38/hg38)
Size:
881 bases
Orientation:
Plus strand
chr11:82,668,435-82,669,315
(GRCh37/hg19)

Genomic View for RPL7AP54 Gene

Genes around RPL7AP54 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7AP54 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7AP54 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7AP54 Gene

Proteins for RPL7AP54 Gene

Post-translational modifications for RPL7AP54 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7AP54 Gene

Domains & Families for RPL7AP54 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7AP54 Gene

Function for RPL7AP54 Gene

Phenotypes From GWAS Catalog for RPL7AP54 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP54 Gene

Localization for RPL7AP54 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7AP54 Gene

Pathways & Interactions for RPL7AP54 Gene

SuperPathways for RPL7AP54 Gene

No Data Available

Interacting Proteins for RPL7AP54 Gene

Gene Ontology (GO) - Biological Process for RPL7AP54 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7AP54 Gene

Drugs & Compounds for RPL7AP54 Gene

No Compound Related Data Available

Transcripts for RPL7AP54 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7AP54 Gene

No ASD Table

Relevant External Links for RPL7AP54 Gene

GeneLoc Exon Structure for
RPL7AP54
ECgene alternative splicing isoforms for
RPL7AP54

Expression for RPL7AP54 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL7AP54 Gene:

RPL7AP54
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7AP54 Gene

Orthologs for RPL7AP54 Gene

No data available for Orthologs and Evolution for RPL7AP54 Gene

Paralogs for RPL7AP54 Gene

No data available for Paralogs for RPL7AP54 Gene

Variants for RPL7AP54 Gene

Additional Variant Information for RPL7AP54 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7AP54

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP54 Gene

Disorders for RPL7AP54 Gene

No disorders were found for RPL7AP54 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7AP54 Gene

Publications for RPL7AP54 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL7AP54 Gene

Sources for RPL7AP54 Gene

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