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Aliases for RPL7AP47 Gene

Aliases for RPL7AP47 Gene

  • Ribosomal Protein L7a Pseudogene 47 2 3
  • RP11-280O24.3 5
  • RPL7A_13_964 3

External Ids for RPL7AP47 Gene

Previous GeneCards Identifiers for RPL7AP47 Gene

  • GC09U901239

Summaries for RPL7AP47 Gene

GeneCards Summary for RPL7AP47 Gene

RPL7AP47 (Ribosomal Protein L7a Pseudogene 47) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7AP47 Gene

Genomics for RPL7AP47 Gene

Regulatory Elements for RPL7AP47 Gene

Enhancers for RPL7AP47 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G014203 2.3 Ensembl ENCODE dbSUPER 0.7 -0.4 -408 1.6 MAX FEZF1 RAD21 YY1 ZNF335 E2F1 ZNF316 HNF4G MAFK ZNF202 RPL7AP47 GC09P014098
GH09G014205 1.1 Ensembl ENCODE dbSUPER 0.7 +1.8 1757 1.4 ZNF362 JUND JUN SIN3A CEBPB EP300 MAFK RPL7AP47 GC09P014255
GH09G014209 1.9 dbSUPER 0.4 +5.7 5664 1.6 PKNOX1 NFIB ZSCAN4 ZNF76 INSM2 ZNF195 FEZF1 ZNF2 ZNF366 SCRT2 CDCA4P1 RPL7AP47 GC09P014255
GH09G014212 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +9.4 9354 1.7 ESRRA NRF1 ZBTB8A OSR2 PRDM6 JUND GATA2 ZSCAN5C ZNF580 HNF4G NFIB RPL7AP47 GC09P014255
GH09G014197 1.2 Ensembl ENCODE dbSUPER 0.4 -5.2 -5225 2.5 SIN3A MAFG MAX MNT RAD21 NR2F2 YY1 ZNF335 MAFF ZNF316 RPL7AP47 GC09P014098
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL7AP47 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL7AP47 Gene

Chromosome:
9
Start:
14,204,218 bp from pter
End:
14,205,094 bp from pter
Size:
877 bases
Orientation:
Plus strand

Genomic View for RPL7AP47 Gene

Genes around RPL7AP47 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7AP47 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7AP47 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7AP47 Gene

Proteins for RPL7AP47 Gene

Post-translational modifications for RPL7AP47 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7AP47 Gene

Domains & Families for RPL7AP47 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7AP47 Gene

Function for RPL7AP47 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP47 Gene

Localization for RPL7AP47 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL7AP47 Gene

Pathways & Interactions for RPL7AP47 Gene

SuperPathways for RPL7AP47 Gene

No Data Available

Interacting Proteins for RPL7AP47 Gene

Gene Ontology (GO) - Biological Process for RPL7AP47 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7AP47 Gene

Drugs & Compounds for RPL7AP47 Gene

No Compound Related Data Available

Transcripts for RPL7AP47 Gene

mRNA/cDNA for RPL7AP47 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7AP47 Gene

No ASD Table

Relevant External Links for RPL7AP47 Gene

GeneLoc Exon Structure for
RPL7AP47
ECgene alternative splicing isoforms for
RPL7AP47

Expression for RPL7AP47 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL7AP47 Gene

mRNA differential expression in normal tissues according to GTEx for RPL7AP47 Gene

This gene is overexpressed in Testis (x4.6).

NURSA nuclear receptor signaling pathways regulating expression of RPL7AP47 Gene:

RPL7AP47
genes like me logo Genes that share expression patterns with RPL7AP47: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7AP47 Gene

Orthologs for RPL7AP47 Gene

Evolution for RPL7AP47 Gene

ENSEMBL:
Gene Tree for RPL7AP47 (if available)
TreeFam:
Gene Tree for RPL7AP47 (if available)

No data available for Orthologs for RPL7AP47 Gene

Paralogs for RPL7AP47 Gene

No data available for Paralogs for RPL7AP47 Gene

Variants for RPL7AP47 Gene

Relevant External Links for RPL7AP47 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7AP47

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP47 Gene

Disorders for RPL7AP47 Gene

Relevant External Links for RPL7AP47

Genetic Association Database (GAD)
RPL7AP47

No disorders were found for RPL7AP47 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL7AP47 Gene

Publications for RPL7AP47 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Novel associations for hypothyroidism include known autoimmune risk loci. (PMID: 22493691) Eriksson N. … Do C.B. (PLoS ONE 2012) 46 64
  3. Genomewide association study of a rapid progression cohort identifies new susceptibility alleles for AIDS (ANRS Genomewide Association Study 03). (PMID: 19754311) Le Clerc S. … Zagury J.F. (J. Infect. Dis. 2009) 46 64

Products for RPL7AP47 Gene

Sources for RPL7AP47 Gene

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