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Aliases for RPL7AP40 Gene

Subcategory (RNA class) for RPL7AP40 Gene

lncRNA

Aliases for RPL7AP40 Gene

  • Ribosomal Protein L7a Pseudogene 40 2 3
  • RPL7A_18_822 3
  • AC073900.1 5

External Ids for RPL7AP40 Gene

ORGUL Members for RPL7AP40 Gene

Previous GeneCards Identifiers for RPL7AP40 Gene

  • GC07M096668
  • GC07M096831

Summaries for RPL7AP40 Gene

GeneCards Summary for RPL7AP40 Gene

RPL7AP40 (Ribosomal Protein L7a Pseudogene 40) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL7AP40 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7AP40 Gene

Genomics for RPL7AP40 Gene

Regulatory Elements for RPL7AP40 Gene

Enhancers for RPL7AP40 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H097313 0.2 ENCODE 0.1 -112.5 -112541 0 TAC1 LOC105375416 RPL7AP40
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL7AP40 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL7AP40 Gene

Chromosome:
7
Start:
97,200,647 bp from pter
End:
97,201,483 bp from pter
Size:
837 bases
Orientation:
Minus strand

Genomic View for RPL7AP40 Gene

Genes around RPL7AP40 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7AP40 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7AP40 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7AP40 Gene

Proteins for RPL7AP40 Gene

Post-translational modifications for RPL7AP40 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7AP40 Gene

Domains & Families for RPL7AP40 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7AP40 Gene

Function for RPL7AP40 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL7AP40
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP40 Gene

Localization for RPL7AP40 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7AP40 Gene

Pathways & Interactions for RPL7AP40 Gene

SuperPathways for RPL7AP40 Gene

No Data Available

Interacting Proteins for RPL7AP40 Gene

Gene Ontology (GO) - Biological Process for RPL7AP40 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7AP40 Gene

Drugs & Compounds for RPL7AP40 Gene

No Compound Related Data Available

Transcripts for RPL7AP40 Gene

mRNA/cDNA for RPL7AP40 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL7AP40
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7AP40 Gene

No ASD Table

Relevant External Links for RPL7AP40 Gene

GeneLoc Exon Structure for
RPL7AP40
ECgene alternative splicing isoforms for
RPL7AP40

Expression for RPL7AP40 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL7AP40 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL7AP40 Gene:

RPL7AP40
genes like me logo Genes that share expression patterns with RPL7AP40: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7AP40 Gene

Orthologs for RPL7AP40 Gene

Evolution for RPL7AP40 Gene

ENSEMBL:
Gene Tree for RPL7AP40 (if available)
TreeFam:
Gene Tree for RPL7AP40 (if available)

No data available for Orthologs for RPL7AP40 Gene

Paralogs for RPL7AP40 Gene

No data available for Paralogs for RPL7AP40 Gene

Variants for RPL7AP40 Gene

Relevant External Links for RPL7AP40 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7AP40

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP40 Gene

Disorders for RPL7AP40 Gene

Relevant External Links for RPL7AP40

Genetic Association Database (GAD)
RPL7AP40

No disorders were found for RPL7AP40 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL7AP40 Gene

Publications for RPL7AP40 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. Polymorphic markers associated with severe oxaliplatin-induced, chronic peripheral neuropathy in colon cancer patients. (PMID: 22020760) Won HH … Park SH (Cancer 2012) 45 60
  3. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 45 60
  4. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox CS … Atwood LD (BMC medical genetics 2007) 45 60

Products for RPL7AP40 Gene

Sources for RPL7AP40 Gene

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