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Aliases for RPL7AP38 Gene

Aliases for RPL7AP38 Gene

  • Ribosomal Protein L7a Pseudogene 38 2 3
  • RPL7A_11_798 3
  • AC073472.1 5

External Ids for RPL7AP38 Gene

Summaries for RPL7AP38 Gene

GeneCards Summary for RPL7AP38 Gene

RPL7AP38 (Ribosomal Protein L7a Pseudogene 38) is a Pseudogene.

Additional gene information for RPL7AP38 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7AP38 Gene

Genomics for RPL7AP38 Gene

Regulatory Elements for RPL7AP38 Gene

Enhancers for RPL7AP38 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H026909 1 Ensembl ENCODE 0.4 -12.0 -12029 1 ELF3 CTCF JUN MAX RARA TEAD3 FOSL1 RCOR1 NR2F6 FOS HOTAIRM1 SKAP2 HOXA2 HOXA-AS2 HOXA3 RPL7AP38 GC07P026846
GH07H026862 1.4 ENCODE dbSUPER 0.2 -58.0 -57994 3 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF766 HOTAIRM1 HNRNPA2B1 HMGB3P20 TPM3P4 RPL23P7 PSMC1P2 HOXA-AS3 HOXA4 HOXA3 HOXA6
GH07H026855 1.4 Ensembl ENCODE dbSUPER 0.2 -64.6 -64561 4 HDAC1 PKNOX1 FEZF1 ZBTB40 TCF12 GLIS2 GATA2 EGR1 ZNF366 EGR2 HOTAIRM1 HOXA5 HOXA-AS3 HOXA4 HOXA3 HOXA6 HOXA1 HOXA2 HOXA-AS2 SKAP2
GH07H026947 0.8 ENCODE 0.3 +26.5 26518 2 SOX13 FOXA2 MLX CEBPG RARA GATA3 LCORL RERE NR2F6 CREM SKAP2 HOTAIRM1 HOXA1 HOXA2 HOXA-AS2 HOXA3 GC07M026955 GC07M026956 RPL7AP38
GH07H026853 0.9 ENCODE dbSUPER 0.2 -68.1 -68132 0 CTCF ZNF654 ZSCAN4 BMI1 RAD21 PRDM6 SMC3 REPIN1 SP7 HOXA5 HOXA-AS3 HOXA4 HOXA3 HOXA6 HOTAIRM1 HOXA1 GC07P026846 RPL7AP38
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL7AP38 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL7AP38 Gene

Chromosome:
7
Start:
26,922,108 bp from pter
End:
26,922,966 bp from pter
Size:
859 bases
Orientation:
Plus strand

Genomic View for RPL7AP38 Gene

Genes around RPL7AP38 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7AP38 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7AP38 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7AP38 Gene

Proteins for RPL7AP38 Gene

Post-translational modifications for RPL7AP38 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7AP38 Gene

Domains & Families for RPL7AP38 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7AP38 Gene

Function for RPL7AP38 Gene

Phenotypes From GWAS Catalog for RPL7AP38 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL7AP38
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP38 Gene

Localization for RPL7AP38 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7AP38 Gene

Pathways & Interactions for RPL7AP38 Gene

SuperPathways for RPL7AP38 Gene

No Data Available

Interacting Proteins for RPL7AP38 Gene

Gene Ontology (GO) - Biological Process for RPL7AP38 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7AP38 Gene

Drugs & Compounds for RPL7AP38 Gene

No Compound Related Data Available

Transcripts for RPL7AP38 Gene

mRNA/cDNA for RPL7AP38 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL7AP38
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7AP38 Gene

No ASD Table

Relevant External Links for RPL7AP38 Gene

GeneLoc Exon Structure for
RPL7AP38
ECgene alternative splicing isoforms for
RPL7AP38

Expression for RPL7AP38 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL7AP38 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL7AP38 Gene:

RPL7AP38
genes like me logo Genes that share expression patterns with RPL7AP38: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7AP38 Gene

Orthologs for RPL7AP38 Gene

Evolution for RPL7AP38 Gene

ENSEMBL:
Gene Tree for RPL7AP38 (if available)
TreeFam:
Gene Tree for RPL7AP38 (if available)

No data available for Orthologs for RPL7AP38 Gene

Paralogs for RPL7AP38 Gene

No data available for Paralogs for RPL7AP38 Gene

Variants for RPL7AP38 Gene

Relevant External Links for RPL7AP38 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7AP38

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP38 Gene

Disorders for RPL7AP38 Gene

No disorders were found for RPL7AP38 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7AP38 Gene

Publications for RPL7AP38 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 60

Products for RPL7AP38 Gene

Sources for RPL7AP38 Gene

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