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Aliases for RPL7AP20 Gene

Aliases for RPL7AP20 Gene

  • Ribosomal Protein L7a Pseudogene 20 2 3
  • RP11-534L20.4 5
  • RPL7A_3_155 3

External Ids for RPL7AP20 Gene

Previous GeneCards Identifiers for RPL7AP20 Gene

  • GC01U902362
  • GC01P206703

Summaries for RPL7AP20 Gene

GeneCards Summary for RPL7AP20 Gene

RPL7AP20 (Ribosomal Protein L7a Pseudogene 20) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7AP20 Gene

Genomics for RPL7AP20 Gene

Regulatory Elements for RPL7AP20 Gene

Enhancers for RPL7AP20 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F206611 1.2 ENCODE 18.9 +83.2 83219 2.2 CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 SP3 NFYC ELK4 RPL7AP20 LOC100420878 MAPKAPK2 RASSF5 EIF2D PIR41610
GH01F205747 1.2 ENCODE 18.9 -779.2 -779178 4.1 CREB3L1 FEZF1 DMAP1 YY1 ZNF143 SP3 NFYC TBX21 MEF2D SSRP1 ELK4 GYG2P2 PM20D1 LOC100420878 RAB29 RPL7AP20 LOC101929459 ENSG00000236108 RBBP5 NUCKS1
GH01F205674 1.4 FANTOM5 ENCODE 10.5 -851.0 -851048 6.2 HDGF PKNOX1 ARNT CREB3L1 SIN3A ZNF2 FOS KLF13 ZNF263 SP3 PM20D1 RAB29 GYG2P2 ELK4 RPL7AP20 LOC100420878 TMCC2 CDK18 SLC45A3 MFSD4A
GH01F207048 1.4 Ensembl ENCODE 10.1 +524.1 524051 9.7 HDGF PKNOX1 CREB3L1 ZFP64 ARID4B SIN3A YBX1 DMAP1 ZNF2 YY1 CDCA4P4 MAPKAPK2 C1orf116 CR1 RPL7AP20 PFKFB2 YOD1
GH01F205710 1.3 Ensembl ENCODE 10.5 -817.6 -817617 1.0 CREB3L1 SIN3A YY1 GLIS2 GATA2 ZNF143 FOS KLF13 SP3 NCOA1 PM20D1 ELK4 LOC100420878 RAB29 GYG2P2 SLC45A3 NUCKS1 RNU6-418P MFSD4A RNU2-19P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL7AP20 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL7AP20 Gene

Chromosome:
1
Start:
206,528,893 bp from pter
End:
206,529,765 bp from pter
Size:
873 bases
Orientation:
Plus strand

Genomic View for RPL7AP20 Gene

Genes around RPL7AP20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7AP20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7AP20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7AP20 Gene

Proteins for RPL7AP20 Gene

Post-translational modifications for RPL7AP20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7AP20 Gene

Domains & Families for RPL7AP20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7AP20 Gene

Function for RPL7AP20 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP20 Gene

Localization for RPL7AP20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL7AP20 Gene

Pathways & Interactions for RPL7AP20 Gene

SuperPathways for RPL7AP20 Gene

No Data Available

Interacting Proteins for RPL7AP20 Gene

Gene Ontology (GO) - Biological Process for RPL7AP20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7AP20 Gene

Transcripts for RPL7AP20 Gene

mRNA/cDNA for RPL7AP20 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7AP20 Gene

No ASD Table

Relevant External Links for RPL7AP20 Gene

GeneLoc Exon Structure for
RPL7AP20
ECgene alternative splicing isoforms for
RPL7AP20

Expression for RPL7AP20 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL7AP20 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL7AP20 Gene:

RPL7AP20
genes like me logo Genes that share expression patterns with RPL7AP20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL7AP20 Gene

Orthologs for RPL7AP20 Gene

Evolution for RPL7AP20 Gene

ENSEMBL:
Gene Tree for RPL7AP20 (if available)
TreeFam:
Gene Tree for RPL7AP20 (if available)

No data available for Orthologs for RPL7AP20 Gene

Paralogs for RPL7AP20 Gene

No data available for Paralogs for RPL7AP20 Gene

Variants for RPL7AP20 Gene

Relevant External Links for RPL7AP20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7AP20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP20 Gene

Disorders for RPL7AP20 Gene

No disorders were found for RPL7AP20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7AP20 Gene

Publications for RPL7AP20 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL7AP20 Gene

Sources for RPL7AP20 Gene

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