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Aliases for RPL7AP18 Gene

Aliases for RPL7AP18 Gene

  • Ribosomal Protein L7a Pseudogene 18 2 3
  • CTA-215D11.4 5
  • RPL7A_1_5 3

External Ids for RPL7AP18 Gene

Previous GeneCards Identifiers for RPL7AP18 Gene

  • GC01M008039

Summaries for RPL7AP18 Gene

GeneCards Summary for RPL7AP18 Gene

RPL7AP18 (Ribosomal Protein L7a Pseudogene 18) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7AP18 Gene

Genomics for RPL7AP18 Gene

Regulatory Elements for RPL7AP18 Gene

Enhancers for RPL7AP18 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F008437 1.3 Ensembl ENCODE 16.2 -380.6 -380596 3.0 PKNOX1 FEZF1 ZNF2 ZNF121 GLIS2 ZNF302 KLF7 FOS ZNF263 TSHZ1 RPL7P7 RERE RPL7AP18 LOC102724552 ENSG00000221083 H6PD MIR34A GC01M008444 PIR35776
GH01F008377 1.2 Ensembl ENCODE 16.2 -320.8 -320751 3.0 PKNOX1 FEZF1 ZNF2 ZNF121 GLIS2 ZNF302 KLF7 ZNF263 ZNF488 TSHZ1 RERE LOC102724552 RPL7P7 RPL7AP18 LOC102725193 SLC45A1 ENSG00000221083 PARK7 H6PD MIR34A
GH01F008058 1.7 FANTOM5 Ensembl ENCODE 0.8 -2.3 -2339 5.1 PKNOX1 MLX ARID4B SLC30A9 ZNF766 FOS KLF13 MXD4 ZNF592 KAT8 ENSG00000238290 PARK7 ERRFI1 RPL7AP18 LOC100129776
GH01F008055 1 Ensembl ENCODE 0.8 +2.3 2299 1.1 JUN SLC30A9 ZNF316 NFE2 FOS MAFK TCF7L2 MAFG CEBPB ZNF623 ENSG00000238290 RPL7AP18
GH01F008069 1.5 VISTA Ensembl ENCODE 0.4 -12.4 -12381 2.5 BCOR PKNOX1 ZNF146 GATA3 CTBP1 ZNF652 TCF7L2 GATAD2A RNF2 NRF1 ENSG00000238290 PARK7 RPL7AP18 LOC100129776
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL7AP18 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL7AP18 Gene

Chromosome:
1
Start:
8,057,181 bp from pter
End:
8,058,487 bp from pter
Size:
1,307 bases
Orientation:
Minus strand

Genomic View for RPL7AP18 Gene

Genes around RPL7AP18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7AP18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7AP18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7AP18 Gene

Proteins for RPL7AP18 Gene

Post-translational modifications for RPL7AP18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7AP18 Gene

Domains & Families for RPL7AP18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7AP18 Gene

Function for RPL7AP18 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP18 Gene

Localization for RPL7AP18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL7AP18 Gene

Pathways & Interactions for RPL7AP18 Gene

SuperPathways for RPL7AP18 Gene

No Data Available

Interacting Proteins for RPL7AP18 Gene

Gene Ontology (GO) - Biological Process for RPL7AP18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7AP18 Gene

Transcripts for RPL7AP18 Gene

mRNA/cDNA for RPL7AP18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7AP18 Gene

No ASD Table

Relevant External Links for RPL7AP18 Gene

GeneLoc Exon Structure for
RPL7AP18
ECgene alternative splicing isoforms for
RPL7AP18

Expression for RPL7AP18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL7AP18 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL7AP18 Gene:

RPL7AP18
genes like me logo Genes that share expression patterns with RPL7AP18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL7AP18 Gene

Orthologs for RPL7AP18 Gene

Evolution for RPL7AP18 Gene

ENSEMBL:
Gene Tree for RPL7AP18 (if available)
TreeFam:
Gene Tree for RPL7AP18 (if available)

No data available for Orthologs for RPL7AP18 Gene

Paralogs for RPL7AP18 Gene

No data available for Paralogs for RPL7AP18 Gene

Variants for RPL7AP18 Gene

Relevant External Links for RPL7AP18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7AP18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP18 Gene

Disorders for RPL7AP18 Gene

Relevant External Links for RPL7AP18

Genetic Association Database (GAD)
RPL7AP18

No disorders were found for RPL7AP18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL7AP18 Gene

Publications for RPL7AP18 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 46 64

Products for RPL7AP18 Gene

Sources for RPL7AP18 Gene

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