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Aliases for RPL7AP17 Gene

Aliases for RPL7AP17 Gene

  • Ribosomal Protein L7a Pseudogene 17 2 3
  • RP11-84O12.2 5
  • RPL7A_3_78 3

External Ids for RPL7AP17 Gene

Previous GeneCards Identifiers for RPL7AP17 Gene

  • GC01U902318
  • GC01M101053

Summaries for RPL7AP17 Gene

GeneCards Summary for RPL7AP17 Gene

RPL7AP17 (Ribosomal Protein L7a Pseudogene 17) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7AP17 Gene

Genomics for RPL7AP17 Gene

Regulatory Elements for RPL7AP17 Gene

Enhancers for RPL7AP17 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G100596 1.2 Ensembl ENCODE dbSUPER 0.4 -9.8 -9792 2.1 PKNOX1 JUN BHLHE40 CEBPG FOSL1 JUND ATF3 GATA2 PBX2 IKZF1 GPR88 RPL7AP17 LINC01349
GH01G100621 1.3 Ensembl ENCODE dbSUPER 0.3 -36.1 -36094 4.4 PKNOX1 JUN SIN3A FEZF1 CEBPG ZIC2 ZBTB40 FOSL1 ZFHX2 GLIS2 VCAM1 GPR88 LINC01349 RTCA RPL7AP17
GH01G100626 1.2 Ensembl ENCODE dbSUPER 0.3 -41.7 -41663 5.8 HDAC1 NR2F1 JUNB CEBPG ZFHX2 JUND GATA2 EED IKZF1 TCF7 VCAM1 LINC01349 RPL7AP17
GH01G100606 0.8 dbSUPER 0.3 -20.8 -20766 3.7 CTCF ATF1 ARNT CREB3L1 BACH1 CEBPG RAD21 FOSL1 ZNF316 GATA2 GPR88 RPL7AP17 LINC01349
GH01G100611 0.7 dbSUPER 0.3 -24.4 -24444 1.1 BACH1 MAFG ZNF592 MAFF ZNF316 NFE2L1 IRF1 NFE2 EMSY MAFK GPR88 RPL7AP17 LINC01349
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL7AP17 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL7AP17 Gene

Chromosome:
1
Start:
100,586,604 bp from pter
End:
100,587,460 bp from pter
Size:
857 bases
Orientation:
Minus strand

Genomic View for RPL7AP17 Gene

Genes around RPL7AP17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7AP17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7AP17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7AP17 Gene

Proteins for RPL7AP17 Gene

Post-translational modifications for RPL7AP17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7AP17 Gene

Domains & Families for RPL7AP17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7AP17 Gene

Function for RPL7AP17 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP17 Gene

Localization for RPL7AP17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL7AP17 Gene

Pathways & Interactions for RPL7AP17 Gene

SuperPathways for RPL7AP17 Gene

No Data Available

Interacting Proteins for RPL7AP17 Gene

Gene Ontology (GO) - Biological Process for RPL7AP17 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7AP17 Gene

Drugs & Compounds for RPL7AP17 Gene

No Compound Related Data Available

Transcripts for RPL7AP17 Gene

mRNA/cDNA for RPL7AP17 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7AP17 Gene

No ASD Table

Relevant External Links for RPL7AP17 Gene

GeneLoc Exon Structure for
RPL7AP17
ECgene alternative splicing isoforms for
RPL7AP17

Expression for RPL7AP17 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL7AP17 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL7AP17 Gene:

RPL7AP17
genes like me logo Genes that share expression patterns with RPL7AP17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7AP17 Gene

Orthologs for RPL7AP17 Gene

Evolution for RPL7AP17 Gene

ENSEMBL:
Gene Tree for RPL7AP17 (if available)
TreeFam:
Gene Tree for RPL7AP17 (if available)

No data available for Orthologs for RPL7AP17 Gene

Paralogs for RPL7AP17 Gene

No data available for Paralogs for RPL7AP17 Gene

Variants for RPL7AP17 Gene

Relevant External Links for RPL7AP17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7AP17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP17 Gene

Disorders for RPL7AP17 Gene

No disorders were found for RPL7AP17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7AP17 Gene

Publications for RPL7AP17 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL7AP17 Gene

Sources for RPL7AP17 Gene

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