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Aliases for RPL7AP16 Gene

Aliases for RPL7AP16 Gene

  • Ribosomal Protein L7a Pseudogene 16 2 3
  • RP11-767N6.2 5
  • RPL7A_2_43 3

External Ids for RPL7AP16 Gene

Previous GeneCards Identifiers for RPL7AP16 Gene

  • GC01U902273
  • GC01M046117

Summaries for RPL7AP16 Gene

GeneCards Summary for RPL7AP16 Gene

RPL7AP16 (Ribosomal Protein L7a Pseudogene 16) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7AP16 Gene

Genomics for RPL7AP16 Gene

Regulatory Elements for RPL7AP16 Gene

Enhancers for RPL7AP16 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G045302 1.2 ENCODE 35.6 +347.7 347663 2.7 CREB3L1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 MEF2D ZNF610 TOE1 RPL7AP16 RPS15AP10 GPBP1L1 TMEM69 RPS8 ZSWIM5 CCDC163 PTCH2 POMGNT1
GH01G046130 1.2 ENCODE 28.2 -481.5 -481452 5.6 MLX CREB3L1 AGO1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 TOE1 GPBP1L1 RPL7AP16 CCDC163 MAST2 EFCAB14-AS1 RPS15AP10 TMEM69 ZSWIM5 TSPAN1
GH01G044720 1.7 Ensembl ENCODE dbSUPER 15.9 +929.0 929047 4.8 MLX CREB3L1 AGO1 ZFP64 FEZF1 YBX1 YY1 ZNF143 SP3 NFYC GPBP1L1 TOE1 RPS8 RPL7AP16 RPS15AP10 DMAP1 TMEM69 SNORD38B RPS15AP11 UROD
GH01G044739 1.4 ENCODE dbSUPER 15.9 +911.8 911768 2.1 CREB3L1 ZFP64 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC ZNF610 GLIS1 TOE1 DMAP1 GPBP1L1 RPL7AP16 RPS15AP10 TMEM69 UROD DPH2 ZSWIM5 BEST4
GH01G046246 1.4 FANTOM5 ENCODE 14.1 -596.2 -596160 3.1 HDGF PKNOX1 MLX CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 TOE1 GPBP1L1 EFCAB14-AS1 RPL7AP16 IPP RPS15AP10 TMEM69 NSUN4 RAD54L GC01M046227
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL7AP16 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL7AP16 Gene

Chromosome:
1
Start:
45,650,978 bp from pter
End:
45,651,850 bp from pter
Size:
873 bases
Orientation:
Minus strand

Genomic View for RPL7AP16 Gene

Genes around RPL7AP16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7AP16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7AP16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7AP16 Gene

Proteins for RPL7AP16 Gene

Post-translational modifications for RPL7AP16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7AP16 Gene

Domains & Families for RPL7AP16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7AP16 Gene

Function for RPL7AP16 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP16 Gene

Localization for RPL7AP16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL7AP16 Gene

Pathways & Interactions for RPL7AP16 Gene

SuperPathways for RPL7AP16 Gene

No Data Available

Interacting Proteins for RPL7AP16 Gene

Gene Ontology (GO) - Biological Process for RPL7AP16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7AP16 Gene

Drugs & Compounds for RPL7AP16 Gene

No Compound Related Data Available

Transcripts for RPL7AP16 Gene

mRNA/cDNA for RPL7AP16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7AP16 Gene

No ASD Table

Relevant External Links for RPL7AP16 Gene

GeneLoc Exon Structure for
RPL7AP16
ECgene alternative splicing isoforms for
RPL7AP16

Expression for RPL7AP16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL7AP16 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL7AP16 Gene:

RPL7AP16
genes like me logo Genes that share expression patterns with RPL7AP16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7AP16 Gene

Orthologs for RPL7AP16 Gene

Evolution for RPL7AP16 Gene

ENSEMBL:
Gene Tree for RPL7AP16 (if available)
TreeFam:
Gene Tree for RPL7AP16 (if available)

No data available for Orthologs for RPL7AP16 Gene

Paralogs for RPL7AP16 Gene

No data available for Paralogs for RPL7AP16 Gene

Variants for RPL7AP16 Gene

Relevant External Links for RPL7AP16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7AP16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP16 Gene

Disorders for RPL7AP16 Gene

No disorders were found for RPL7AP16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7AP16 Gene

Publications for RPL7AP16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL7AP16 Gene

Sources for RPL7AP16 Gene

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