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Aliases for RPL6P4 Gene

Aliases for RPL6P4 Gene

  • Ribosomal Protein L6 Pseudogene 4 2 3
  • RP11-345J13.1 5
  • RPL6_3_194 3

External Ids for RPL6P4 Gene

Previous GeneCards Identifiers for RPL6P4 Gene

  • GC02P011160
  • GC02P011243
  • GC02P011244

Summaries for RPL6P4 Gene

GeneCards Summary for RPL6P4 Gene

RPL6P4 (Ribosomal Protein L6 Pseudogene 4) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL6P4 Gene

Genomics for RPL6P4 Gene

Regulatory Elements for RPL6P4 Gene

Enhancers for RPL6P4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G011073 0.7 ENCODE 0.3 -28.7 -28684 0.2 CTCF ZSCAN4 HLF SIN3A MNT ZNF48 RAD21 FOXA1 JUND SMARCA4 RPL6P4 GC02P010935
GH02G010934 1.3 Ensembl ENCODE 0.1 -165.9 -165856 2.6 PKNOX1 FOXA2 MLX ARID4B DMAP1 FOS ZHX2 MXD4 ZNF592 KAT8 KCNF1 ENSG00000257135 GC02P010935 RPL6P4
GH02G010962 0.7 ENCODE 0.1 -138.3 -138343 1.6 CTCF NFIB GATA3 ARID3A EED ETV6 RELB HCFC1 CBFB BHLHE40 KCNF1 GC02P010935 RPL6P4
GH02G010983 0.7 Ensembl ENCODE 0.1 -118.6 -118565 1.0 POLR2A SMARCA4 NR2C2 GC02P010935 RPL6P4
GH02G010977 0.6 Ensembl 0.1 -124.8 -124823 0.2 ATF3 CUX1 FOXP2 CEBPG NR2C2 SPI1 GABPA KCNF1 GC02P010935 RPL6P4
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL6P4 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL6P4 Gene

Chromosome:
2
Start:
11,102,123 bp from pter
End:
11,103,026 bp from pter
Size:
904 bases
Orientation:
Plus strand

Genomic View for RPL6P4 Gene

Genes around RPL6P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL6P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL6P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL6P4 Gene

Proteins for RPL6P4 Gene

Post-translational modifications for RPL6P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL6P4 Gene

Domains & Families for RPL6P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL6P4 Gene

Function for RPL6P4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL6P4 Gene

Localization for RPL6P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL6P4 Gene

Pathways & Interactions for RPL6P4 Gene

SuperPathways for RPL6P4 Gene

No Data Available

Interacting Proteins for RPL6P4 Gene

Gene Ontology (GO) - Biological Process for RPL6P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL6P4 Gene

Drugs & Compounds for RPL6P4 Gene

No Compound Related Data Available

Transcripts for RPL6P4 Gene

mRNA/cDNA for RPL6P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL6P4 Gene

No ASD Table

Relevant External Links for RPL6P4 Gene

GeneLoc Exon Structure for
RPL6P4
ECgene alternative splicing isoforms for
RPL6P4

Expression for RPL6P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL6P4 Gene

mRNA differential expression in normal tissues according to GTEx for RPL6P4 Gene

This gene is overexpressed in Brain - Cortex (x14.9), Brain - Frontal Cortex (BA9) (x10.6), and Brain - Anterior cingulate cortex (BA24) (x10.2).

NURSA nuclear receptor signaling pathways regulating expression of RPL6P4 Gene:

RPL6P4
genes like me logo Genes that share expression patterns with RPL6P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL6P4 Gene

Orthologs for RPL6P4 Gene

Evolution for RPL6P4 Gene

ENSEMBL:
Gene Tree for RPL6P4 (if available)
TreeFam:
Gene Tree for RPL6P4 (if available)

No data available for Orthologs for RPL6P4 Gene

Paralogs for RPL6P4 Gene

No data available for Paralogs for RPL6P4 Gene

Variants for RPL6P4 Gene

Relevant External Links for RPL6P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL6P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL6P4 Gene

Disorders for RPL6P4 Gene

No disorders were found for RPL6P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL6P4 Gene

Publications for RPL6P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL6P4 Gene

Sources for RPL6P4 Gene

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