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Aliases for RPL6P3 Gene

Aliases for RPL6P3 Gene

  • Ribosomal Protein L6 Pseudogene 3 2 3
  • RP11-553N16.1 5
  • RPL6_2_187 3

External Ids for RPL6P3 Gene

Previous GeneCards Identifiers for RPL6P3 Gene

  • GC01U902275
  • GC01P241996

Summaries for RPL6P3 Gene

GeneCards Summary for RPL6P3 Gene

RPL6P3 (Ribosomal Protein L6 Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL6P3 Gene

Genomics for RPL6P3 Gene

Regulatory Elements for RPL6P3 Gene

Enhancers for RPL6P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F241828 0.5 Ensembl 0.8 -3.1 -3109 0.4 ZFP3 CEBPB PRDM1 WDR64 RPL6P3 LOC105373231
GH01F241824 0.8 ENCODE 0.4 -7.8 -7776 0.2 BRD4 TBP PKNOX1 CBX3 TBL1XR1 GTF2E2 ZBTB40 CHAMP1 DIDO1 TRIM24 LOC105373231 RPL6P3
GH01F241821 0.6 Ensembl 0.4 -10.3 -10309 0.4 ZNF263 ATF1 EP300 ZNF264 ZNF121 JUND FOS SPI1 LOC105373231 RPL6P3
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL6P3 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL6P3 Gene

Chromosome:
1
Start:
241,831,909 bp from pter
End:
241,832,827 bp from pter
Size:
919 bases
Orientation:
Plus strand

Genomic View for RPL6P3 Gene

Genes around RPL6P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL6P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL6P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL6P3 Gene

Proteins for RPL6P3 Gene

Post-translational modifications for RPL6P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL6P3 Gene

Domains & Families for RPL6P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL6P3 Gene

Function for RPL6P3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL6P3 Gene

Localization for RPL6P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL6P3 Gene

Pathways & Interactions for RPL6P3 Gene

SuperPathways for RPL6P3 Gene

No Data Available

Interacting Proteins for RPL6P3 Gene

Gene Ontology (GO) - Biological Process for RPL6P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL6P3 Gene

Transcripts for RPL6P3 Gene

mRNA/cDNA for RPL6P3 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL6P3 Gene

No ASD Table

Relevant External Links for RPL6P3 Gene

GeneLoc Exon Structure for
RPL6P3
ECgene alternative splicing isoforms for
RPL6P3

Expression for RPL6P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL6P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL6P3 Gene:

RPL6P3
genes like me logo Genes that share expression patterns with RPL6P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL6P3 Gene

Orthologs for RPL6P3 Gene

Evolution for RPL6P3 Gene

ENSEMBL:
Gene Tree for RPL6P3 (if available)
TreeFam:
Gene Tree for RPL6P3 (if available)

No data available for Orthologs for RPL6P3 Gene

Paralogs for RPL6P3 Gene

No data available for Paralogs for RPL6P3 Gene

Variants for RPL6P3 Gene

Relevant External Links for RPL6P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL6P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL6P3 Gene

Disorders for RPL6P3 Gene

No disorders were found for RPL6P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL6P3 Gene

Publications for RPL6P3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL6P3 Gene

Sources for RPL6P3 Gene

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