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Aliases for RPL6P27 Gene

Aliases for RPL6P27 Gene

  • Ribosomal Protein L6 Pseudogene 27 2 3
  • RPL6_10_1582 3
  • AP005202.1 5

External Ids for RPL6P27 Gene

Summaries for RPL6P27 Gene

GeneCards Summary for RPL6P27 Gene

RPL6P27 (Ribosomal Protein L6 Pseudogene 27) is a Pseudogene.

Additional gene information for RPL6P27 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL6P27 Gene

Genomics for RPL6P27 Gene

Regulatory Elements for RPL6P27 Gene

Enhancers for RPL6P27 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH18H006482 1.1 Ensembl ENCODE 0.4 -19.8 -19783 0 ELF3 INSM2 KLF17 ZNF2 THRB RAD21 RARA GLIS2 ZNF143 KLF7 ENSG00000266065 RPL6P27
GH18H006462 0.2 Ensembl 0.7 +0.1 129 0 RPL6P27 GC18P006454
GH18H006486 0.4 ENCODE 0.3 -24.1 -24103 1 EBF1 ENSG00000266065 RPL6P27
GH18H006488 0.2 ENCODE 0.3 -25.1 -25138 0 ENSG00000266065 RPL6P27
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL6P27 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL6P27 Gene

Chromosome:
18
Start:
6,462,092 bp from pter
End:
6,463,029 bp from pter
Size:
938 bases
Orientation:
Minus strand

Genomic View for RPL6P27 Gene

Genes around RPL6P27 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL6P27 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL6P27 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL6P27 Gene

Proteins for RPL6P27 Gene

Post-translational modifications for RPL6P27 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL6P27 Gene

Domains & Families for RPL6P27 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL6P27 Gene

Function for RPL6P27 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL6P27
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL6P27 Gene

Localization for RPL6P27 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL6P27 Gene

Pathways & Interactions for RPL6P27 Gene

SuperPathways for RPL6P27 Gene

No Data Available

Interacting Proteins for RPL6P27 Gene

Gene Ontology (GO) - Biological Process for RPL6P27 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL6P27 Gene

Drugs & Compounds for RPL6P27 Gene

No Compound Related Data Available

Transcripts for RPL6P27 Gene

mRNA/cDNA for RPL6P27 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL6P27
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL6P27 Gene

No ASD Table

Relevant External Links for RPL6P27 Gene

GeneLoc Exon Structure for
RPL6P27
ECgene alternative splicing isoforms for
RPL6P27

Expression for RPL6P27 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL6P27 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL6P27 Gene:

RPL6P27
genes like me logo Genes that share expression patterns with RPL6P27: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL6P27 Gene

Orthologs for RPL6P27 Gene

Evolution for RPL6P27 Gene

ENSEMBL:
Gene Tree for RPL6P27 (if available)
TreeFam:
Gene Tree for RPL6P27 (if available)

No data available for Orthologs for RPL6P27 Gene

Paralogs for RPL6P27 Gene

No data available for Paralogs for RPL6P27 Gene

Variants for RPL6P27 Gene

Relevant External Links for RPL6P27 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL6P27

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL6P27 Gene

Disorders for RPL6P27 Gene

Relevant External Links for RPL6P27

Genetic Association Database (GAD)
RPL6P27
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RPL6P27

No disorders were found for RPL6P27 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL6P27 Gene

Publications for RPL6P27 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. Novel associations for hypothyroidism include known autoimmune risk loci. (PMID: 22493691) Eriksson N … Do CB (PloS one 2012) 45 60
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 60

Products for RPL6P27 Gene

Sources for RPL6P27 Gene

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