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Aliases for RPL6P25 Gene

Aliases for RPL6P25 Gene

  • Ribosomal Protein L6 Pseudogene 25 2 3 5
  • RPL6_15_1263 3

External Ids for RPL6P25 Gene

Previous GeneCards Identifiers for RPL6P25 Gene

  • GC12P082069
  • GC12P083546

Summaries for RPL6P25 Gene

GeneCards Summary for RPL6P25 Gene

RPL6P25 (Ribosomal Protein L6 Pseudogene 25) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL6P25 Gene

Genomics for RPL6P25 Gene

Regulatory Elements for RPL6P25 Gene

Enhancers for RPL6P25 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G083113 0.5 ENCODE 0.3 -37.1 -37093 1.1 KLF1 FOS ZNF384 TRIM28 RPL6P25 RNU6-977P
GH12G083042 0.7 Ensembl ENCODE 0.1 -108.4 -108406 0.8 JUND NFIB EZH2 RNU6-977P RPL6P25
GH12G083115 0.2 ENCODE 0.3 -36.2 -36155 0.1 RPL6P25 RNU6-977P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL6P25 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL6P25 Gene

Chromosome:
12
Start:
83,151,311 bp from pter
End:
83,152,232 bp from pter
Size:
922 bases
Orientation:
Plus strand

Genomic View for RPL6P25 Gene

Genes around RPL6P25 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL6P25 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL6P25 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL6P25 Gene

Proteins for RPL6P25 Gene

Post-translational modifications for RPL6P25 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL6P25 Gene

Domains & Families for RPL6P25 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL6P25 Gene

Function for RPL6P25 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL6P25 Gene

Localization for RPL6P25 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL6P25 Gene

Pathways & Interactions for RPL6P25 Gene

SuperPathways for RPL6P25 Gene

No Data Available

Interacting Proteins for RPL6P25 Gene

Gene Ontology (GO) - Biological Process for RPL6P25 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL6P25 Gene

Transcripts for RPL6P25 Gene

mRNA/cDNA for RPL6P25 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL6P25 Gene

No ASD Table

Relevant External Links for RPL6P25 Gene

GeneLoc Exon Structure for
RPL6P25
ECgene alternative splicing isoforms for
RPL6P25

Expression for RPL6P25 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL6P25 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL6P25 Gene:

RPL6P25
genes like me logo Genes that share expression patterns with RPL6P25: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL6P25 Gene

Orthologs for RPL6P25 Gene

Evolution for RPL6P25 Gene

ENSEMBL:
Gene Tree for RPL6P25 (if available)
TreeFam:
Gene Tree for RPL6P25 (if available)

No data available for Orthologs for RPL6P25 Gene

Paralogs for RPL6P25 Gene

No data available for Paralogs for RPL6P25 Gene

Variants for RPL6P25 Gene

Relevant External Links for RPL6P25 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL6P25

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL6P25 Gene

Disorders for RPL6P25 Gene

Relevant External Links for RPL6P25

Genetic Association Database (GAD)
RPL6P25

No disorders were found for RPL6P25 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL6P25 Gene

Publications for RPL6P25 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 3 64
  3. The neuronal transporter gene SLC6A15 confers risk to major depression. (PMID: 21521612) Kohli M.A. … Binder E.B. (Neuron 2011) 46 64
  4. Identification of candidate loci at 6p21 and 21q22 in a genome-wide association study of cardiac manifestations of neonatal lupus. (PMID: 20662065) Clancy R.M. … Buyon J.P. (Arthritis Rheum. 2010) 46 64
  5. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel D.P. … Karasik D. (BMC Med. Genet. 2007) 46 64

Products for RPL6P25 Gene

Sources for RPL6P25 Gene

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