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Aliases for RPL6P18 Gene

Aliases for RPL6P18 Gene

  • Ribosomal Protein L6 Pseudogene 18 2 3
  • RP11-108N13.1 5
  • RPL6_13_667 3

External Ids for RPL6P18 Gene

Previous GeneCards Identifiers for RPL6P18 Gene

  • GC06P023213

Summaries for RPL6P18 Gene

GeneCards Summary for RPL6P18 Gene

RPL6P18 (Ribosomal Protein L6 Pseudogene 18) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL6P18 Gene

Genomics for RPL6P18 Gene

Regulatory Elements for RPL6P18 Gene

Enhancers for RPL6P18 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F023097 0.2 ENCODE 0.8 -4.9 -4920 1.1 RPL6P18 GC06P022836
GH06F022891 1.3 FANTOM5 Ensembl ENCODE 0.1 -210.1 -210132 1.5 JUN RFX5 RCOR1 FOS PRDM10 CREM MAFK NFE2L2 JUNB USF2 GC06P022836 RPL6P18
GH06F022887 1 Ensembl ENCODE 0.1 -214.5 -214522 1.9 PKNOX1 TBL1XR1 FEZF1 BMI1 EBF1 RELA ZNF366 EED PRDM10 KLF8 GC06P022836 RPL6P18
GH06F022876 0.9 Ensembl ENCODE 0.1 -222.4 -222358 7.3 BRD4 JUN BHLHE40 TEAD4 CEBPB SIN3A NR2F2 JUND POU5F1 FOS RN7SKP240 GC06P022836 RPL6P18
GH06F023003 0.8 Ensembl ENCODE 0.1 -98.7 -98716 1.4 CTCF FEZF1 FOS FOXP2 RPL6P18 GC06P022836
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL6P18 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL6P18 Gene

Chromosome:
6
Start:
23,102,659 bp from pter
End:
23,103,577 bp from pter
Size:
919 bases
Orientation:
Plus strand

Genomic View for RPL6P18 Gene

Genes around RPL6P18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL6P18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL6P18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL6P18 Gene

Proteins for RPL6P18 Gene

Post-translational modifications for RPL6P18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL6P18 Gene

Domains & Families for RPL6P18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL6P18 Gene

Function for RPL6P18 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL6P18 Gene

Localization for RPL6P18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL6P18 Gene

Pathways & Interactions for RPL6P18 Gene

SuperPathways for RPL6P18 Gene

No Data Available

Interacting Proteins for RPL6P18 Gene

Gene Ontology (GO) - Biological Process for RPL6P18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL6P18 Gene

Transcripts for RPL6P18 Gene

mRNA/cDNA for RPL6P18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL6P18 Gene

No ASD Table

Relevant External Links for RPL6P18 Gene

GeneLoc Exon Structure for
RPL6P18
ECgene alternative splicing isoforms for
RPL6P18

Expression for RPL6P18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL6P18 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL6P18 Gene:

RPL6P18
genes like me logo Genes that share expression patterns with RPL6P18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL6P18 Gene

Orthologs for RPL6P18 Gene

Evolution for RPL6P18 Gene

ENSEMBL:
Gene Tree for RPL6P18 (if available)
TreeFam:
Gene Tree for RPL6P18 (if available)

No data available for Orthologs for RPL6P18 Gene

Paralogs for RPL6P18 Gene

No data available for Paralogs for RPL6P18 Gene

Variants for RPL6P18 Gene

Relevant External Links for RPL6P18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL6P18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL6P18 Gene

Disorders for RPL6P18 Gene

Relevant External Links for RPL6P18

Genetic Association Database (GAD)
RPL6P18

No disorders were found for RPL6P18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL6P18 Gene

Publications for RPL6P18 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Whole genome association scan for genetic polymorphisms influencing information processing speed. (PMID: 21130836) Luciano M. … Deary I.J. (Biol Psychol 2011) 46 64
  3. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel D.P. … Karasik D. (BMC Med. Genet. 2007) 46 64
  4. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox C.S. … Atwood L.D. (BMC Med. Genet. 2007) 46 64
  5. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan R.S. … Benjamin E.J. (BMC Med. Genet. 2007) 46 64

Products for RPL6P18 Gene

Sources for RPL6P18 Gene

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