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Aliases for RPL6P18 Gene

Aliases for RPL6P18 Gene

  • Ribosomal Protein L6 Pseudogene 18 2 3
  • RPL6_13_667 3
  • AL591416.1 5

External Ids for RPL6P18 Gene

Previous GeneCards Identifiers for RPL6P18 Gene

  • GC06P023213

Summaries for RPL6P18 Gene

GeneCards Summary for RPL6P18 Gene

RPL6P18 (Ribosomal Protein L6 Pseudogene 18) is a Pseudogene.

Additional gene information for RPL6P18 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL6P18 Gene

Genomics for RPL6P18 Gene

GeneHancer (GH) Regulatory Elements for RPL6P18 Gene

Promoters and enhancers for RPL6P18 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I023097 Enhancer 0.2 ENCODE 0.8 -4.9 -4920 1.1 RPL6P18 LOC105374974 GC06P022836
GH06I022891 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.1 -210.1 -210132 1.5 ZBTB21 JUN RFX5 POLR2A RCOR1 PRDM10 FOS FOSL2 CEBPB JUNB GC06P022834 GC06P022836 RPL6P18 LOC105374974
GH06I023003 Enhancer 0.5 ENCODE 0.2 -98.7 -98715 1.4 FOXP2 RCOR1 FOS FEZF1 RPL6P18 GC06P022836 LOC105374974
GH06I022954 Enhancer 0.8 Ensembl ENCODE 0.1 -147.1 -147108 2.1 CTCF SOX5 SOX13 FOXA2 ETS1 FOXA1 SP1 FOSL2 PRDM10 GC06P022836 RPL6P18 LOC105374974
GH06I022876 Enhancer 0.8 Ensembl ENCODE 0.1 -222.4 -222358 7.3 ZNF189 JUN CEBPB REST NR2F2 SP1 JUND POLR2A POU5F1 ZBTB33 RN7SKP240 GC06P022836 GC06P022834 RPL6P18 LOC105374974
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL6P18 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL6P18 Gene

Genomic Locations for RPL6P18 Gene
chr6:23,102,659-23,103,577
(GRCh38/hg38)
Size:
919 bases
Orientation:
Plus strand
chr6:23,102,887-23,103,805
(GRCh37/hg19)

Genomic View for RPL6P18 Gene

Genes around RPL6P18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL6P18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL6P18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL6P18 Gene

Proteins for RPL6P18 Gene

Post-translational modifications for RPL6P18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL6P18 Gene

Domains & Families for RPL6P18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL6P18 Gene

Function for RPL6P18 Gene

Phenotypes From GWAS Catalog for RPL6P18 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL6P18 Gene

Localization for RPL6P18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL6P18 Gene

Pathways & Interactions for RPL6P18 Gene

SuperPathways for RPL6P18 Gene

No Data Available

Interacting Proteins for RPL6P18 Gene

Gene Ontology (GO) - Biological Process for RPL6P18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL6P18 Gene

Drugs & Compounds for RPL6P18 Gene

No Compound Related Data Available

Transcripts for RPL6P18 Gene

mRNA/cDNA for RPL6P18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL6P18 Gene

No ASD Table

Relevant External Links for RPL6P18 Gene

GeneLoc Exon Structure for
RPL6P18
ECgene alternative splicing isoforms for
RPL6P18

Expression for RPL6P18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL6P18 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL6P18 Gene:

RPL6P18
genes like me logo Genes that share expression patterns with RPL6P18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL6P18 Gene

Orthologs for RPL6P18 Gene

Evolution for RPL6P18 Gene

ENSEMBL:
Gene Tree for RPL6P18 (if available)
TreeFam:
Gene Tree for RPL6P18 (if available)

No data available for Orthologs for RPL6P18 Gene

Paralogs for RPL6P18 Gene

No data available for Paralogs for RPL6P18 Gene

Variants for RPL6P18 Gene

Additional Variant Information for RPL6P18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL6P18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL6P18 Gene

Disorders for RPL6P18 Gene

Additional Disease Information for RPL6P18

Genetic Association Database
(GAD)

No disorders were found for RPL6P18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL6P18 Gene

Publications for RPL6P18 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Whole genome association scan for genetic polymorphisms influencing information processing speed. (PMID: 21130836) Luciano M … Deary IJ (Biological psychology 2011) 44 58
  3. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 44 58
  4. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox CS … Atwood LD (BMC medical genetics 2007) 44 58
  5. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 44 58

Products for RPL6P18 Gene

Sources for RPL6P18 Gene

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