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Aliases for RPL6P15 Gene

Subcategory (RNA class) for RPL6P15 Gene

lncRNA

Aliases for RPL6P15 Gene

  • Ribosomal Protein L6 Pseudogene 15 2 3
  • RPL6_3_613 3
  • AC010307.1 5

External Ids for RPL6P15 Gene

ORGUL Members for RPL6P15 Gene

Previous GeneCards Identifiers for RPL6P15 Gene

  • GC05U901085
  • GC05M132508

Summaries for RPL6P15 Gene

GeneCards Summary for RPL6P15 Gene

RPL6P15 (Ribosomal Protein L6 Pseudogene 15) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL6P15 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL6P15 Gene

Genomics for RPL6P15 Gene

GeneHancer (GH) Regulatory Elements for RPL6P15 Gene

Promoters and enhancers for RPL6P15 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I133170 Enhancer 0.5 ENCODE 0.8 +2.1 2149 0.2 SOX13 KLF1 SP5 ZNF444 FOXA1 ENSG00000249478 MIR1289-2 RPL6P15 CTB-49A3.2
GH05I133240 Enhancer 1.5 FANTOM5 Ensembl ENCODE 0.2 -68.1 -68073 2 HDGF PKNOX1 SMAD1 ARNT IRF4 POLR2B ZNF766 CBX5 ZNF143 FOS AFF4 ZCCHC10 ENSG00000249478 RPL6P15 FSTL4
GH05I133216 Enhancer 0.6 FANTOM5 0.3 -43.1 -43106 0.1 L3MBTL2 NR4A1 CEBPB CEBPG ZBTB40 ZNF518A ATF4 ATF7 TRIM24 MGA ENSG00000249478 CTB-49A3.2 RPL6P15 FSTL4
GH05I133225 Enhancer 0.7 ENCODE 0.2 -55.5 -55535 6.1 MEIS2 CTCF KLF1 PKNOX1 ZBTB21 ZNF76 FEZF1 FOSL1 ZFHX2 ZNF366 MIR1289-2 ENSG00000249478 RPL6P15 FSTL4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL6P15 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL6P15 Gene

Genomic Locations for RPL6P15 Gene
chr5:133,172,218-133,173,053
(GRCh38/hg38)
Size:
836 bases
Orientation:
Minus strand
chr5:132,507,910-132,508,745
(GRCh37/hg19)

Genomic View for RPL6P15 Gene

Genes around RPL6P15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL6P15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL6P15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL6P15 Gene

Proteins for RPL6P15 Gene

Post-translational modifications for RPL6P15 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL6P15 Gene

Domains & Families for RPL6P15 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL6P15 Gene

Function for RPL6P15 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL6P15 Gene

Localization for RPL6P15 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL6P15 Gene

Pathways & Interactions for RPL6P15 Gene

SuperPathways for RPL6P15 Gene

No Data Available

Interacting Proteins for RPL6P15 Gene

Gene Ontology (GO) - Biological Process for RPL6P15 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL6P15 Gene

Drugs & Compounds for RPL6P15 Gene

No Compound Related Data Available

Transcripts for RPL6P15 Gene

mRNA/cDNA for RPL6P15 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL6P15 Gene

No ASD Table

Relevant External Links for RPL6P15 Gene

GeneLoc Exon Structure for
RPL6P15
ECgene alternative splicing isoforms for
RPL6P15

Expression for RPL6P15 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL6P15 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL6P15 Gene:

RPL6P15
genes like me logo Genes that share expression patterns with RPL6P15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL6P15 Gene

Orthologs for RPL6P15 Gene

Evolution for RPL6P15 Gene

ENSEMBL:
Gene Tree for RPL6P15 (if available)
TreeFam:
Gene Tree for RPL6P15 (if available)

No data available for Orthologs for RPL6P15 Gene

Paralogs for RPL6P15 Gene

No data available for Paralogs for RPL6P15 Gene

Variants for RPL6P15 Gene

Additional Variant Information for RPL6P15 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL6P15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL6P15 Gene

Disorders for RPL6P15 Gene

No disorders were found for RPL6P15 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL6P15 Gene

Publications for RPL6P15 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL6P15 Gene

Sources for RPL6P15 Gene

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