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Aliases for RPL6P13 Gene

Aliases for RPL6P13 Gene

  • Ribosomal Protein L6 Pseudogene 13 2 3
  • RP11-397E7.1 5
  • RPL6_10_498 3

External Ids for RPL6P13 Gene

Previous GeneCards Identifiers for RPL6P13 Gene

  • GC04P088011
  • GC04P087792

Summaries for RPL6P13 Gene

GeneCards Summary for RPL6P13 Gene

RPL6P13 (Ribosomal Protein L6 Pseudogene 13) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL6P13 Gene

Genomics for RPL6P13 Gene

Regulatory Elements for RPL6P13 Gene

Enhancers for RPL6P13 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F087388 1.4 FANTOM5 ENCODE 29 +520.2 520219 4.1 HDGF CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SP3 SP5 RPL6P13 NUDT9 HSD17B11 LOC100419572 HSD17B13 AFF1 RN7SL681P
GH04F086890 1 ENCODE 21.4 +22.1 22138 3.0 ZFP64 SIN3A ZNF48 ZNF2 GLIS2 ZNF302 KLF7 SP3 REST ZNF518A RPL6P13 LOC100419572 ENSG00000261496 LOC260422 C4orf36 SLC10A6 GC04P086879
GH04F087219 1 ENCODE 12.5 +350.0 349968 2.2 HDGF PKNOX1 CREB3L1 ARID4B SIN3A ZNF2 YY1 ZNF121 GLIS2 ELK1 RPL6P13 LOC260422 KLHL8 HSD17B13 GC04P087226 GAPDHP60
GH04F087004 1.1 ENCODE 10.2 +137.4 137442 6.2 PKNOX1 ARNT CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A ZNF2 YY1 ENSG00000261496 NUDT9 RPL6P13 AFF1 LOC260422 SLC10A6 GC04P087042 GC04P086967 PIR55151
GH04F087374 0.8 ENCODE 11.6 +505.6 505642 2.3 HDAC1 CTCF PKNOX1 ZNF644 RAD21 GTF3C2 NCOR1 POLR3A HNF4G SMC3 LOC100419572 NUDT9 RPL6P13 HSD17B11 HSD17B13 RN7SL681P ENSG00000255723
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL6P13 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL6P13 Gene

Chromosome:
4
Start:
86,870,165 bp from pter
End:
86,871,433 bp from pter
Size:
1,269 bases
Orientation:
Plus strand

Genomic View for RPL6P13 Gene

Genes around RPL6P13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL6P13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL6P13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL6P13 Gene

Proteins for RPL6P13 Gene

Post-translational modifications for RPL6P13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL6P13 Gene

Domains & Families for RPL6P13 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL6P13 Gene

Function for RPL6P13 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL6P13 Gene

Localization for RPL6P13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL6P13 Gene

Pathways & Interactions for RPL6P13 Gene

SuperPathways for RPL6P13 Gene

No Data Available

Interacting Proteins for RPL6P13 Gene

Gene Ontology (GO) - Biological Process for RPL6P13 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL6P13 Gene

Transcripts for RPL6P13 Gene

mRNA/cDNA for RPL6P13 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL6P13 Gene

No ASD Table

Relevant External Links for RPL6P13 Gene

GeneLoc Exon Structure for
RPL6P13
ECgene alternative splicing isoforms for
RPL6P13

Expression for RPL6P13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL6P13 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL6P13 Gene:

RPL6P13
genes like me logo Genes that share expression patterns with RPL6P13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL6P13 Gene

Orthologs for RPL6P13 Gene

Evolution for RPL6P13 Gene

ENSEMBL:
Gene Tree for RPL6P13 (if available)
TreeFam:
Gene Tree for RPL6P13 (if available)

No data available for Orthologs for RPL6P13 Gene

Paralogs for RPL6P13 Gene

No data available for Paralogs for RPL6P13 Gene

Variants for RPL6P13 Gene

Relevant External Links for RPL6P13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL6P13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL6P13 Gene

Disorders for RPL6P13 Gene

No disorders were found for RPL6P13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL6P13 Gene

Publications for RPL6P13 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL6P13 Gene

Sources for RPL6P13 Gene

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