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Aliases for RPL5P4 Gene

Aliases for RPL5P4 Gene

  • Ribosomal Protein L5 Pseudogene 4 2 3 5
  • RPL5_1_31 3

External Ids for RPL5P4 Gene

Previous GeneCards Identifiers for RPL5P4 Gene

  • GC01U902379
  • GC01P035817

Summaries for RPL5P4 Gene

GeneCards Summary for RPL5P4 Gene

RPL5P4 (Ribosomal Protein L5 Pseudogene 4) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL5P4 Gene

Genomics for RPL5P4 Gene

Regulatory Elements for RPL5P4 Gene

Enhancers for RPL5P4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F034865 1 Ensembl ENCODE 63 -484.2 -484222 2.9 CREB3L1 ZNF493 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF121 ZNF143 SFPQ ZMYM1 LOC653160 ZMYM4 RPL5P4 ENSG00000230163 TMEM35B GJB4 TFAP2E SMIM12
GH01F036154 0.2 ENCODE 53 +806.0 806020 4.5 PKNOX1 ARID4B SIN3A ZNF2 ZNF548 FOS ZNF263 SP3 JUNB REST SFPQ ZMYM4 RPL5P4 THRAP3 MAP7D1 COL8A2 LOC105378647 EVA1B TRAPPC3 RN7SL131P
GH01F035800 1 Ensembl ENCODE 44.9 +450.0 449953 1.2 ZNF493 ZFP64 ZEB1 ZNF121 ZNF23 ZNF302 ZNF354C KLF7 SMARCA5 ZNF680 ZMYM1 SFPQ LOC653160 ZMYM4 RPL5P4 ENSG00000230163 THRAP3 LOC105378647 COL8A2 EVA1B
GH01F036222 0.5 ENCODE 36.5 +873.7 873744 4.7 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ARID4B SIN3A FEZF1 DMAP1 RPL5P4 EVA1B ZMYM4 THRAP3 LOC105378647 MAP7D1 TRAPPC3 AGO1 COL8A2 ADPRHL2
GH01F036148 1 FANTOM5 ENCODE 33.7 +800.2 800224 4.9 HDGF PKNOX1 ARNT CREB3L1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SFPQ RPL5P4 MAP7D1 EVA1B THRAP3 LOC105378647 STK40 COL8A2 AGO3 SH3D21
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL5P4 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL5P4 Gene

Chromosome:
1
Start:
35,350,648 bp from pter
End:
35,351,666 bp from pter
Size:
1,019 bases
Orientation:
Plus strand

Genomic View for RPL5P4 Gene

Genes around RPL5P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL5P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL5P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL5P4 Gene

Proteins for RPL5P4 Gene

Post-translational modifications for RPL5P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL5P4 Gene

Domains & Families for RPL5P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL5P4 Gene

Function for RPL5P4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL5P4 Gene

Localization for RPL5P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL5P4 Gene

Pathways & Interactions for RPL5P4 Gene

SuperPathways for RPL5P4 Gene

No Data Available

Interacting Proteins for RPL5P4 Gene

Gene Ontology (GO) - Biological Process for RPL5P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL5P4 Gene

Transcripts for RPL5P4 Gene

mRNA/cDNA for RPL5P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL5P4 Gene

No ASD Table

Relevant External Links for RPL5P4 Gene

GeneLoc Exon Structure for
RPL5P4
ECgene alternative splicing isoforms for
RPL5P4

Expression for RPL5P4 Gene

mRNA expression in normal human tissues for RPL5P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL5P4 Gene:

RPL5P4
genes like me logo Genes that share expression patterns with RPL5P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL5P4 Gene

Orthologs for RPL5P4 Gene

Evolution for RPL5P4 Gene

ENSEMBL:
Gene Tree for RPL5P4 (if available)
TreeFam:
Gene Tree for RPL5P4 (if available)

No data available for Orthologs for RPL5P4 Gene

Paralogs for RPL5P4 Gene

No data available for Paralogs for RPL5P4 Gene

Variants for RPL5P4 Gene

Relevant External Links for RPL5P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL5P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL5P4 Gene

Disorders for RPL5P4 Gene

No disorders were found for RPL5P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL5P4 Gene

Publications for RPL5P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL5P4 Gene

Sources for RPL5P4 Gene

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