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Aliases for RPL5P34 Gene

Aliases for RPL5P34 Gene

  • Ribosomal Protein L5 Pseudogene 34 2 3 5
  • RPL5_15_1754 3

External Ids for RPL5P34 Gene

Previous GeneCards Identifiers for RPL5P34 Gene

  • GC22M041503
  • GC22M043173

Summaries for RPL5P34 Gene

GeneCards Summary for RPL5P34 Gene

RPL5P34 (Ribosomal Protein L5 Pseudogene 34) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL5P34 Gene

Genomics for RPL5P34 Gene

Regulatory Elements for RPL5P34 Gene

Enhancers for RPL5P34 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22F042612 1.2 ENCODE 41.8 +162.9 162886 4.3 CREB3L1 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 XRCC6 RPL5P34 FAM109B RRP7BP CYB5R3 SERHL2 ATP5L2 NAGA GC22P042614 PIR37149
GH22F042077 1.1 ENCODE 44.8 +698.1 698109 3.9 PKNOX1 CREB3L1 WRNIP1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 SMDT1 EP300 PHF5A RPL5P34 CYP2D6 XRCC6 RN7SKP80 EP300-AS1 ENSG00000232754 RRP7BP
GH22F042623 0.9 ENCODE 45.4 +153.7 153700 1.1 ZNF493 ZFP64 ZNF48 ZEB1 ZNF354C ZNF138 KLF7 ZNF680 SP3 ZNF654 RN7SKP80 RRP7BP RPL5P34 CYB5R3 OGFRP1 ENSG00000273366 ENSG00000233903 NAGA LOC100506679 ARFGAP3
GH22F041961 0.9 ENCODE 45.3 +816.3 816279 0.2 ZFP64 ZNF493 ZEB1 ZNF302 ZNF138 SCRT2 ZNF680 SP3 ZNF654 OVOL3 EP300 RN7SKP80 PHF5A RPL5P34 NDUFA6 RRP7BP XRCC6 ENSG00000232754 EP300-AS1 OGFRP1
GH22F041815 0.9 ENCODE 35.2 +959.8 959807 3.9 ZFP64 ZNF493 ZNF121 GATA2 ZNF138 ZNF354C ZNF680 ZNF654 OVOL3 REST EP300 PHF5A RN7SKP80 RPL5P34 XRCC6 MEI1 ENSG00000232754 RRP7BP EP300-AS1 TOB2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL5P34 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL5P34 Gene

Chromosome:
22
Start:
42,776,345 bp from pter
End:
42,777,370 bp from pter
Size:
1,026 bases
Orientation:
Minus strand

Genomic View for RPL5P34 Gene

Genes around RPL5P34 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL5P34 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL5P34 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL5P34 Gene

Proteins for RPL5P34 Gene

Post-translational modifications for RPL5P34 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL5P34 Gene

Domains & Families for RPL5P34 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL5P34 Gene

Function for RPL5P34 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL5P34 Gene

Localization for RPL5P34 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL5P34 Gene

Pathways & Interactions for RPL5P34 Gene

SuperPathways for RPL5P34 Gene

No Data Available

Interacting Proteins for RPL5P34 Gene

Gene Ontology (GO) - Biological Process for RPL5P34 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL5P34 Gene

Transcripts for RPL5P34 Gene

mRNA/cDNA for RPL5P34 Gene

(8) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL5P34 Gene

No ASD Table

Relevant External Links for RPL5P34 Gene

GeneLoc Exon Structure for
RPL5P34
ECgene alternative splicing isoforms for
RPL5P34

Expression for RPL5P34 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL5P34 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL5P34 Gene:

RPL5P34
genes like me logo Genes that share expression patterns with RPL5P34: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL5P34 Gene

Orthologs for RPL5P34 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RPL5P34 Gene

Organism Taxonomy Gene Similarity Type Details
sea squirt
(Ciona intestinalis)
Ascidiacea Cin.15557 34
Species where no ortholog for RPL5P34 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RPL5P34 Gene

ENSEMBL:
Gene Tree for RPL5P34 (if available)
TreeFam:
Gene Tree for RPL5P34 (if available)

Paralogs for RPL5P34 Gene

No data available for Paralogs for RPL5P34 Gene

Variants for RPL5P34 Gene

Relevant External Links for RPL5P34 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL5P34

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL5P34 Gene

Disorders for RPL5P34 Gene

No disorders were found for RPL5P34 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL5P34 Gene

Publications for RPL5P34 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL5P34 Gene

Sources for RPL5P34 Gene

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