Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL5P30 Gene

Aliases for RPL5P30 Gene

  • Ribosomal Protein L5 Pseudogene 30 2 3 5
  • RPL5_16_1181 3

External Ids for RPL5P30 Gene

Previous GeneCards Identifiers for RPL5P30 Gene

  • GC11U901251
  • GC11P118434

Summaries for RPL5P30 Gene

GeneCards Summary for RPL5P30 Gene

RPL5P30 (Ribosomal Protein L5 Pseudogene 30) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL5P30 Gene

Genomics for RPL5P30 Gene

Regulatory Elements for RPL5P30 Gene

Enhancers for RPL5P30 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G119167 1.1 ENCODE 18.6 +608.3 608312 2.8 PKNOX1 ARNT WRNIP1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF302 BCL9L IFT46 ENSG00000254909 UBE4A RPL23AP64 ARCN1 HINFP DDX6 ENSG00000254428 ENSG00000272186
GH11G119090 1.7 Ensembl ENCODE dbSUPER 11.7 +533.1 533055 5.9 CREB3L1 AGO1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC TBX21 HINFP ARCN1 RNF26 ENSG00000254909 C2CD2L BCL9L RPL23AP64 UBE4A RPS25 IFT46
GH11G118614 1.7 FANTOM5 ENCODE dbSUPER 10.8 +58.8 58753 9.2 HDGF PKNOX1 FOXA2 ARNT ZFP64 SIN3A ARID4B YBX1 DMAP1 ZBTB7B TREHP1 LOC105369519 TREH IFT46 RNU6-1157P ARCN1 RPL5P30 KMT2A ENSG00000255384 ENSG00000254873
GH11G118658 1.5 Ensembl ENCODE dbSUPER 11.8 +98.6 98583 2.0 ATF1 CREB3L1 AGO1 ARID4B SIN3A DMAP1 ZNF2 ZNF48 SLC30A9 GLIS2 TREHP1 IFT46 TREH ENSG00000254909 RPL5P30 UBE4A ENSG00000254428 RPL23AP64 BCL9L RNF26
GH11G118529 1.1 ENCODE 12 -29.7 -29695 3.3 HDGF ARNT CREB3L1 AGO1 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 IFT46 ENSG00000254909 UBE4A THY1 RPL23AP64 BCL9L RPL5P30 ENSG00000254428 ARCN1 DSCAML1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL5P30 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL5P30 Gene

Chromosome:
11
Start:
118,560,617 bp from pter
End:
118,561,638 bp from pter
Size:
1,022 bases
Orientation:
Plus strand

Genomic View for RPL5P30 Gene

Genes around RPL5P30 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL5P30 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL5P30 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL5P30 Gene

Proteins for RPL5P30 Gene

Post-translational modifications for RPL5P30 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL5P30 Gene

Domains & Families for RPL5P30 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL5P30 Gene

Function for RPL5P30 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL5P30 Gene

Localization for RPL5P30 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL5P30 Gene

Pathways & Interactions for RPL5P30 Gene

SuperPathways for RPL5P30 Gene

No Data Available

Interacting Proteins for RPL5P30 Gene

Gene Ontology (GO) - Biological Process for RPL5P30 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL5P30 Gene

Transcripts for RPL5P30 Gene

mRNA/cDNA for RPL5P30 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL5P30 Gene

No ASD Table

Relevant External Links for RPL5P30 Gene

GeneLoc Exon Structure for
RPL5P30
ECgene alternative splicing isoforms for
RPL5P30

Expression for RPL5P30 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL5P30 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL5P30 Gene:

RPL5P30
genes like me logo Genes that share expression patterns with RPL5P30: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL5P30 Gene

Orthologs for RPL5P30 Gene

Evolution for RPL5P30 Gene

ENSEMBL:
Gene Tree for RPL5P30 (if available)
TreeFam:
Gene Tree for RPL5P30 (if available)

No data available for Orthologs for RPL5P30 Gene

Paralogs for RPL5P30 Gene

No data available for Paralogs for RPL5P30 Gene

Variants for RPL5P30 Gene

Relevant External Links for RPL5P30 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL5P30

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL5P30 Gene

Disorders for RPL5P30 Gene

No disorders were found for RPL5P30 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL5P30 Gene

Publications for RPL5P30 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL5P30 Gene

Sources for RPL5P30 Gene

Content
Loading form....