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Aliases for RPL5P30 Gene

Aliases for RPL5P30 Gene

  • Ribosomal Protein L5 Pseudogene 30 2 3 5
  • RPL5_16_1181 3

External Ids for RPL5P30 Gene

Previous GeneCards Identifiers for RPL5P30 Gene

  • GC11U901251
  • GC11P118434

Summaries for RPL5P30 Gene

GeneCards Summary for RPL5P30 Gene

RPL5P30 (Ribosomal Protein L5 Pseudogene 30) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL5P30 Gene

Genomics for RPL5P30 Gene

Regulatory Elements for RPL5P30 Gene

Enhancers for RPL5P30 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F119167 1.1 ENCODE 40.8 +608.3 608312 2.8 PKNOX1 ARNT WRNIP1 ZFP64 ARID4B DMAP1 ZNF2 YY1 ZNF302 ZNF207 ENSG00000254909 UBE4A ARCN1 RPL23AP64 RPL5P30 ENSG00000254428 HINFP BCL9L RNF26 IFT46
GH11F118698 1.4 FANTOM5 Ensembl ENCODE 16.2 +139.2 139154 2.7 ZNF146 ZFP64 ZNF140 ZNF316 NR2F6 ZNF584 ZNF433 ZBTB11 NR2F1 CEBPB LOC105369519 RPL5P30 CCDC84 IFT46 ENSG00000255121 TREH HINFP ENSG00000272186 CD3E CD3G
GH11F118874 1.6 FANTOM5 Ensembl ENCODE 12.3 +316.3 316318 5.9 HDGF PKNOX1 YY1 GATA2 ZNF207 PAF1 TBX21 PPARG ZNF585B SMARCA4 IFT46 RPL5P30 TREHP1 UPK2 ENSG00000255121 BCL9L RN7SL688P DDX6 MIR6716 PHLDB1
GH11F118906 1.9 FANTOM5 Ensembl ENCODE 9.8 +358.2 358176 24.6 MLX CREB3L1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC LOC101929133 RPS25 HINFP CCDC84 CXCR5 DPAGT1 UBE4A HMBS IFT46 ENSG00000222529
GH11F118571 1.1 ENCODE 16.5 +12.0 12049 2.7 PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 YY1 SP3 JUNB IFT46 CCDC84 HINFP ENSG00000255121 RPL5P30 LOC101929133 BCL9L UBE4A ENSG00000254909 RPL23AP64
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL5P30 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL5P30 Gene

Chromosome:
11
Start:
118,560,617 bp from pter
End:
118,561,638 bp from pter
Size:
1,022 bases
Orientation:
Plus strand

Genomic View for RPL5P30 Gene

Genes around RPL5P30 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL5P30 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL5P30 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL5P30 Gene

Proteins for RPL5P30 Gene

Post-translational modifications for RPL5P30 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL5P30 Gene

Domains & Families for RPL5P30 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL5P30 Gene

Function for RPL5P30 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL5P30 Gene

Localization for RPL5P30 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL5P30 Gene

Pathways & Interactions for RPL5P30 Gene

SuperPathways for RPL5P30 Gene

No Data Available

Interacting Proteins for RPL5P30 Gene

Gene Ontology (GO) - Biological Process for RPL5P30 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL5P30 Gene

Transcripts for RPL5P30 Gene

mRNA/cDNA for RPL5P30 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL5P30 Gene

No ASD Table

Relevant External Links for RPL5P30 Gene

GeneLoc Exon Structure for
RPL5P30
ECgene alternative splicing isoforms for
RPL5P30

Expression for RPL5P30 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL5P30 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL5P30 Gene:

RPL5P30
genes like me logo Genes that share expression patterns with RPL5P30: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL5P30 Gene

Orthologs for RPL5P30 Gene

Evolution for RPL5P30 Gene

ENSEMBL:
Gene Tree for RPL5P30 (if available)
TreeFam:
Gene Tree for RPL5P30 (if available)

No data available for Orthologs for RPL5P30 Gene

Paralogs for RPL5P30 Gene

No data available for Paralogs for RPL5P30 Gene

Variants for RPL5P30 Gene

Relevant External Links for RPL5P30 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL5P30

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL5P30 Gene

Disorders for RPL5P30 Gene

No disorders were found for RPL5P30 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL5P30 Gene

Publications for RPL5P30 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL5P30 Gene

Sources for RPL5P30 Gene

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