Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL5P30 Gene

Aliases for RPL5P30 Gene

  • Ribosomal Protein L5 Pseudogene 30 2 3 5
  • RPL5_16_1181 3

External Ids for RPL5P30 Gene

Previous GeneCards Identifiers for RPL5P30 Gene

  • GC11U901251
  • GC11P118434

Summaries for RPL5P30 Gene

GeneCards Summary for RPL5P30 Gene

RPL5P30 (Ribosomal Protein L5 Pseudogene 30) is a Pseudogene.

Additional gene information for RPL5P30 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL5P30 Gene

Genomics for RPL5P30 Gene

GeneHancer (GH) Regulatory Elements for RPL5P30 Gene

Promoters and enhancers for RPL5P30 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I119090 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 49.3 +533.1 533055 5.9 HDGF PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 GC11M119097 H2AFX KMT2A HINFP UBE4A ARCN1 BCL9L RPL5P30 ENSG00000254909 CCDC84
GH11I118571 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 16.5 +12.1 12148 2.9 PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 YY1 POLR2B ZNF766 SP3 IFT46 ARCN1 RPL5P30 KMT2A CCDC84 VPS11 ENSG00000255121 HINFP HMBS
GH11I118906 Promoter/Enhancer 2.9 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 9.8 +358.2 358176 24.6 CLOCK MLX ZFP64 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 BCL9L DPAGT1 UBE4A ENSG00000254909 RPL23AP64 ARCN1 ENSG00000254428 RNF26 CCDC84 KMT2A
GH11I119055 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 14 +496.5 496520 3 HDGF CLOCK SMAD1 ARNT ARID4B SIN3A DMAP1 YY1 E2F8 ZNF143 GC11P119057 HYOU1 VPS11 RPL5P30 KMT2A HINFP UBE4A HMBS PIR44546
GH11I118529 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 12 -29.7 -29695 3.3 HDGF ATF1 ARID4B SIN3A DMAP1 ZNF2 ZNF48 ETS1 GLIS2 ZNF207 GC11P118532 LOC101929089 TMEM25 ENSG00000254909 UBE4A BCL9L RPL23AP64 ARCN1 IFT46 ENSG00000254428
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL5P30 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL5P30 Gene

Genomic Locations for RPL5P30 Gene
chr11:118,560,617-118,561,638
(GRCh38/hg38)
Size:
1,022 bases
Orientation:
Plus strand
chr11:118,431,332-118,432,353
(GRCh37/hg19)

Genomic View for RPL5P30 Gene

Genes around RPL5P30 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL5P30 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL5P30 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL5P30 Gene

Proteins for RPL5P30 Gene

Post-translational modifications for RPL5P30 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL5P30 Gene

Domains & Families for RPL5P30 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL5P30 Gene

Function for RPL5P30 Gene

Phenotypes From GWAS Catalog for RPL5P30 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL5P30 Gene

Localization for RPL5P30 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL5P30 Gene

Pathways & Interactions for RPL5P30 Gene

SuperPathways for RPL5P30 Gene

No Data Available

Interacting Proteins for RPL5P30 Gene

Gene Ontology (GO) - Biological Process for RPL5P30 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL5P30 Gene

Drugs & Compounds for RPL5P30 Gene

No Compound Related Data Available

Transcripts for RPL5P30 Gene

mRNA/cDNA for RPL5P30 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL5P30 Gene

No ASD Table

Relevant External Links for RPL5P30 Gene

GeneLoc Exon Structure for
RPL5P30
ECgene alternative splicing isoforms for
RPL5P30

Expression for RPL5P30 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL5P30 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL5P30 Gene:

RPL5P30
genes like me logo Genes that share expression patterns with RPL5P30: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL5P30 Gene

Orthologs for RPL5P30 Gene

Evolution for RPL5P30 Gene

ENSEMBL:
Gene Tree for RPL5P30 (if available)
TreeFam:
Gene Tree for RPL5P30 (if available)

No data available for Orthologs for RPL5P30 Gene

Paralogs for RPL5P30 Gene

No data available for Paralogs for RPL5P30 Gene

Variants for RPL5P30 Gene

Additional Variant Information for RPL5P30 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL5P30

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL5P30 Gene

Disorders for RPL5P30 Gene

No disorders were found for RPL5P30 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL5P30 Gene

Publications for RPL5P30 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL5P30 Gene

Sources for RPL5P30 Gene

Content
Loading form....