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Aliases for RPL5P3 Gene

Aliases for RPL5P3 Gene

  • Ribosomal Protein L5 Pseudogene 3 2 3 5
  • RPL5_13_1449 3
  • HsT18216 3

External Ids for RPL5P3 Gene

Previous GeneCards Identifiers for RPL5P3 Gene

  • GC15U900524
  • GC15M069143
  • GC15M071356

Summaries for RPL5P3 Gene

GeneCards Summary for RPL5P3 Gene

RPL5P3 (Ribosomal Protein L5 Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL5P3 Gene

Genomics for RPL5P3 Gene

Regulatory Elements for RPL5P3 Gene

Enhancers for RPL5P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G071078 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -16.1 -16065 3.5 PKNOX1 SIN3A FEZF1 BMI1 ZBTB7B ZNF766 SCRT2 FOS EGR2 YY2 CT62 THSD4 LOC105370886 RPL5P3
GH15G071066 0.9 ENCODE dbSUPER 0.7 -3.4 -3438 1.7 ZNF680 KLF1 BHLHE40 ZNF837 ZMYM3 ZNF580 FOS KDM1A PRDM4 NFE2L2 CT62 RPL5P3 LOC105370886
GH15G071070 1.2 ENCODE dbSUPER 0.4 -7.3 -7252 1.4 FEZF1 ZNF2 GLIS2 ZNF207 FOS KLF7 SP3 YY2 TSHZ1 ZNF518A RPL5P3 LOC105370886
GH15G071082 1.2 ENCODE dbSUPER 0.4 -19.2 -19237 2.1 ZNF493 ZFP64 ZNF121 KLF7 ZNF548 ZNF202 SP3 JUNB REST TSHZ1 RPL17P39 LRRC49 THAP10 CT62 LARP6 ENSG00000259744 LOC105370886 RPL5P3
GH15G071042 1.4 FANTOM5 ENCODE dbSUPER 0.3 +20.3 20275 3.4 PKNOX1 NFIB FEZF1 YBX1 SCRT2 FOS RCOR1 ZHX2 GATAD2B ZNF592 HMGB1P6 ENSG00000259744 RPL5P3 THAP10
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL5P3 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL5P3 Gene

Chromosome:
15
Start:
71,063,038 bp from pter
End:
71,064,065 bp from pter
Size:
1,028 bases
Orientation:
Minus strand

Genomic View for RPL5P3 Gene

Genes around RPL5P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL5P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL5P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL5P3 Gene

Proteins for RPL5P3 Gene

Post-translational modifications for RPL5P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL5P3 Gene

Domains & Families for RPL5P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL5P3 Gene

Function for RPL5P3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL5P3 Gene

Localization for RPL5P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL5P3 Gene

Pathways & Interactions for RPL5P3 Gene

SuperPathways for RPL5P3 Gene

No Data Available

Interacting Proteins for RPL5P3 Gene

Gene Ontology (GO) - Biological Process for RPL5P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL5P3 Gene

Drugs & Compounds for RPL5P3 Gene

No Compound Related Data Available

Transcripts for RPL5P3 Gene

mRNA/cDNA for RPL5P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL5P3 Gene

No ASD Table

Relevant External Links for RPL5P3 Gene

GeneLoc Exon Structure for
RPL5P3
ECgene alternative splicing isoforms for
RPL5P3

Expression for RPL5P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL5P3 Gene

mRNA differential expression in normal tissues according to GTEx for RPL5P3 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x8.6) and Brain - Cerebellum (x8.2).

NURSA nuclear receptor signaling pathways regulating expression of RPL5P3 Gene:

RPL5P3
genes like me logo Genes that share expression patterns with RPL5P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL5P3 Gene

Orthologs for RPL5P3 Gene

Evolution for RPL5P3 Gene

ENSEMBL:
Gene Tree for RPL5P3 (if available)
TreeFam:
Gene Tree for RPL5P3 (if available)

No data available for Orthologs for RPL5P3 Gene

Paralogs for RPL5P3 Gene

No data available for Paralogs for RPL5P3 Gene

Variants for RPL5P3 Gene

Relevant External Links for RPL5P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL5P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL5P3 Gene

Disorders for RPL5P3 Gene

No disorders were found for RPL5P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL5P3 Gene

Publications for RPL5P3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL5P3 Gene

Sources for RPL5P3 Gene

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