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Aliases for RPL5P28 Gene

Aliases for RPL5P28 Gene

  • Ribosomal Protein L5 Pseudogene 28 2 3 5
  • RPL5_11_1110 3

External Ids for RPL5P28 Gene

Previous GeneCards Identifiers for RPL5P28 Gene

  • GC10M134809
  • GC10M134957

Summaries for RPL5P28 Gene

GeneCards Summary for RPL5P28 Gene

RPL5P28 (Ribosomal Protein L5 Pseudogene 28) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL5P28 Gene

Genomics for RPL5P28 Gene

Regulatory Elements for RPL5P28 Gene

Enhancers for RPL5P28 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F133145 0.4 ENCODE 0.8 -0.4 -352 0.3 FOS KNDC1 CFAP46 ENSG00000235245 RPL5P28
GH10F133158 0.8 ENCODE 0.4 -13.8 -13805 1.7 CTCF PKNOX1 ZNF792 ZIC2 ZKSCAN1 ZFHX2 GLIS2 ZBTB48 PATZ1 ZNF600 KNDC1 ENSG00000235245 CFAP46 RPL5P28
GH10F133150 0.6 ENCODE 0.4 -6.3 -6308 2.1 BCOR JUND RNF2 HDAC2 POLR2A ZNF580 KDM1A GLI4 MNT KNDC1 ADGRA1 ZNF511 TUBGCP2 NKX6-2 RPL5P28
GH10F133161 0.5 ENCODE 0.4 -14.8 -14792 0.1 POLR2A KLF9 ZBTB7A KNDC1 RPL5P28
GH10F133160 0.6 ENCODE 0.3 -15.1 -15072 0.2 ZBTB10 GLIS2 ZNF692 POLR2A ZBTB8A ZBTB26 ZBTB20 ZXDB KNDC1 RPL5P28
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL5P28 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL5P28 Gene

Chromosome:
10
Start:
133,143,507 bp from pter
End:
133,145,350 bp from pter
Size:
1,844 bases
Orientation:
Minus strand

Genomic View for RPL5P28 Gene

Genes around RPL5P28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL5P28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL5P28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL5P28 Gene

Proteins for RPL5P28 Gene

Post-translational modifications for RPL5P28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL5P28 Gene

Domains & Families for RPL5P28 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL5P28 Gene

Function for RPL5P28 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL5P28 Gene

Localization for RPL5P28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL5P28 Gene

Pathways & Interactions for RPL5P28 Gene

SuperPathways for RPL5P28 Gene

No Data Available

Interacting Proteins for RPL5P28 Gene

Gene Ontology (GO) - Biological Process for RPL5P28 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL5P28 Gene

Transcripts for RPL5P28 Gene

mRNA/cDNA for RPL5P28 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL5P28 Gene

No ASD Table

Relevant External Links for RPL5P28 Gene

GeneLoc Exon Structure for
RPL5P28
ECgene alternative splicing isoforms for
RPL5P28

Expression for RPL5P28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL5P28 Gene

mRNA differential expression in normal tissues according to GTEx for RPL5P28 Gene

This gene is overexpressed in Brain - Cerebellum (x8.2), Brain - Cerebellar Hemisphere (x7.7), and Pituitary (x6.7).

NURSA nuclear receptor signaling pathways regulating expression of RPL5P28 Gene:

RPL5P28
genes like me logo Genes that share expression patterns with RPL5P28: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL5P28 Gene

Orthologs for RPL5P28 Gene

Evolution for RPL5P28 Gene

ENSEMBL:
Gene Tree for RPL5P28 (if available)
TreeFam:
Gene Tree for RPL5P28 (if available)

No data available for Orthologs for RPL5P28 Gene

Paralogs for RPL5P28 Gene

No data available for Paralogs for RPL5P28 Gene

Variants for RPL5P28 Gene

Relevant External Links for RPL5P28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL5P28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL5P28 Gene

Disorders for RPL5P28 Gene

No disorders were found for RPL5P28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL5P28 Gene

Publications for RPL5P28 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL5P28 Gene

Sources for RPL5P28 Gene

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