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Aliases for RPL5P13 Gene

Aliases for RPL5P13 Gene

  • Ribosomal Protein L5 Pseudogene 13 2 3 5
  • RPL5_5_523 3

External Ids for RPL5P13 Gene

Previous GeneCards Identifiers for RPL5P13 Gene

  • GC04U900992
  • GC04M143209

Summaries for RPL5P13 Gene

GeneCards Summary for RPL5P13 Gene

RPL5P13 (Ribosomal Protein L5 Pseudogene 13) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL5P13 Gene

Genomics for RPL5P13 Gene

Regulatory Elements for RPL5P13 Gene

Enhancers for RPL5P13 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F142272 0.6 ENCODE 0.4 +13.6 13611 2.9 ZNF316 FOS EMSY MAFK RPL5P13 GC04M142220
GH04F142263 0.8 Ensembl ENCODE 0.3 +22.5 22468 2.5 ARID4B SIN3A ZNF48 GLIS2 ZNF207 FOS KDM4B SP3 NCOA1 SSRP1 RPL5P13 GC04M142220
GH04F142306 0.2 ENCODE 0.3 -20.2 -20157 2.9 INPP4B LSM3P4 RPL5P13
GH04F142303 0.2 Ensembl 0.3 -16.6 -16576 0.8 ATF1 MLX ARID4B DMAP1 SP5 MIER2 PPARG KAT8 NFIL3 MIER3 LSM3P4 RPL5P13
GH04F142248 0.2 ENCODE 0.3 +38.2 38159 1.8 BHLHE40 FOS MAFK GC04M142220 RPL5P13
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL5P13 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL5P13 Gene

Chromosome:
4
Start:
142,286,917 bp from pter
End:
142,287,625 bp from pter
Size:
709 bases
Orientation:
Minus strand

Genomic View for RPL5P13 Gene

Genes around RPL5P13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL5P13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL5P13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL5P13 Gene

Proteins for RPL5P13 Gene

Post-translational modifications for RPL5P13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL5P13 Gene

Domains & Families for RPL5P13 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL5P13 Gene

Function for RPL5P13 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL5P13 Gene

Localization for RPL5P13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL5P13 Gene

Pathways & Interactions for RPL5P13 Gene

SuperPathways for RPL5P13 Gene

No Data Available

Interacting Proteins for RPL5P13 Gene

Gene Ontology (GO) - Biological Process for RPL5P13 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL5P13 Gene

Transcripts for RPL5P13 Gene

mRNA/cDNA for RPL5P13 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL5P13 Gene

No ASD Table

Relevant External Links for RPL5P13 Gene

GeneLoc Exon Structure for
RPL5P13
ECgene alternative splicing isoforms for
RPL5P13

Expression for RPL5P13 Gene

mRNA expression in normal human tissues for RPL5P13 Gene

mRNA differential expression in normal tissues according to GTEx for RPL5P13 Gene

This gene is overexpressed in Breast - Mammary Tissue (x10.5).

NURSA nuclear receptor signaling pathways regulating expression of RPL5P13 Gene:

RPL5P13
genes like me logo Genes that share expression patterns with RPL5P13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL5P13 Gene

Orthologs for RPL5P13 Gene

Evolution for RPL5P13 Gene

ENSEMBL:
Gene Tree for RPL5P13 (if available)
TreeFam:
Gene Tree for RPL5P13 (if available)

No data available for Orthologs for RPL5P13 Gene

Paralogs for RPL5P13 Gene

No data available for Paralogs for RPL5P13 Gene

Variants for RPL5P13 Gene

Relevant External Links for RPL5P13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL5P13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL5P13 Gene

Disorders for RPL5P13 Gene

No disorders were found for RPL5P13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL5P13 Gene

Publications for RPL5P13 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL5P13 Gene

Sources for RPL5P13 Gene

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