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Aliases for RPL5P1 Gene

Aliases for RPL5P1 Gene

  • Ribosomal Protein L5 Pseudogene 1 2 3 5
  • RPL5_12_1419 3

External Ids for RPL5P1 Gene

Previous GeneCards Identifiers for RPL5P1 Gene

  • GC15U990045
  • GC15M025155

Summaries for RPL5P1 Gene

GeneCards Summary for RPL5P1 Gene

RPL5P1 (Ribosomal Protein L5 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL5P1 Gene

Genomics for RPL5P1 Gene

Regulatory Elements for RPL5P1 Gene

Enhancers for RPL5P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15F025844 1.4 FANTOM5 Ensembl ENCODE 11 -938.3 -938333 6.9 ATF1 PKNOX1 INSM2 KLF17 ARID4B ZNF48 RAD21 RARA GLIS2 ZNF366 RPL5P1 LOC105370738 UBE3A MIR4715 GC15P025818
GH15F024897 0.2 ENCODE 0.4 +10.8 10794 2.8 SMARCA4 POLR2A BCL11A POU5F1 ETS1 SNURF SNRPN SNORD109A SNORD116-2 SNORD116-3 SNORD116-1 ENSG00000261069 RPL5P1 PIR42622
GH15F024877 1.7 FANTOM5 Ensembl ENCODE 0.3 +31.6 31629 1.1 ELF3 TBP ARID4B DMAP1 ZNF48 RAD21 RARA THAP11 KLF11 ZBTB11 SNRPN SNURF NPAP1 PIR42622 RPL5P1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL5P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL5P1 Gene

Chromosome:
15
Start:
24,908,864 bp from pter
End:
24,909,900 bp from pter
Size:
1,037 bases
Orientation:
Minus strand

Genomic View for RPL5P1 Gene

Genes around RPL5P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL5P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL5P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL5P1 Gene

Proteins for RPL5P1 Gene

Post-translational modifications for RPL5P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL5P1 Gene

Domains & Families for RPL5P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL5P1 Gene

Function for RPL5P1 Gene

Molecular function for RPL5P1 Gene

GENATLAS Biochemistry:
60S ribosomal protein L5,pseudogene,embedded in SNRPN intron

Phenotypes for RPL5P1 Gene

GenomeRNAi human phenotypes for RPL5P1:
genes like me logo Genes that share phenotypes with RPL5P1: view

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL5P1 Gene

Localization for RPL5P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL5P1 Gene

Pathways & Interactions for RPL5P1 Gene

SuperPathways for RPL5P1 Gene

No Data Available

Interacting Proteins for RPL5P1 Gene

Gene Ontology (GO) - Biological Process for RPL5P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL5P1 Gene

Transcripts for RPL5P1 Gene

mRNA/cDNA for RPL5P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL5P1 Gene

No ASD Table

Relevant External Links for RPL5P1 Gene

GeneLoc Exon Structure for
RPL5P1
ECgene alternative splicing isoforms for
RPL5P1

Expression for RPL5P1 Gene

mRNA expression in normal human tissues for RPL5P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL5P1 Gene:

RPL5P1
genes like me logo Genes that share expression patterns with RPL5P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL5P1 Gene

Orthologs for RPL5P1 Gene

Evolution for RPL5P1 Gene

ENSEMBL:
Gene Tree for RPL5P1 (if available)
TreeFam:
Gene Tree for RPL5P1 (if available)

No data available for Orthologs for RPL5P1 Gene

Paralogs for RPL5P1 Gene

No data available for Paralogs for RPL5P1 Gene

Variants for RPL5P1 Gene

Relevant External Links for RPL5P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL5P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL5P1 Gene

Disorders for RPL5P1 Gene

No disorders were found for RPL5P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL5P1 Gene

Publications for RPL5P1 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL5P1 Gene

Sources for RPL5P1 Gene

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