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Aliases for RPL4P6 Gene

Aliases for RPL4P6 Gene

  • Ribosomal Protein L4 Pseudogene 6 2 3 5
  • RPL4_4_1752 3

External Ids for RPL4P6 Gene

Previous GeneCards Identifiers for RPL4P6 Gene

  • GC22U900526
  • GC22M040983
  • GC22M040984

Summaries for RPL4P6 Gene

GeneCards Summary for RPL4P6 Gene

RPL4P6 (Ribosomal Protein L4 Pseudogene 6) is a Pseudogene.

Additional gene information for RPL4P6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL4P6 Gene

Genomics for RPL4P6 Gene

GeneHancer (GH) Regulatory Elements for RPL4P6 Gene

Promoters and enhancers for RPL4P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22I040588 Enhancer 0.8 ENCODE 550.8 -1.1 -1090 1.5 ELF3 MLX ARID4B DMAP1 RAD21 ZNF48 ZSCAN9 RARA ETS1 THAP11 GC22M042618 RPL4P6 MKL1 ENSG00000229999 LOC101927257 SGSM3 GAPDHP37 MCHR1
GH22I041284 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 20.6 -700.3 -700298 8.1 FEZF1 DMAP1 YY1 SLC30A9 E2F8 ZNF143 SP3 NFYC SSRP1 ZNF610 RANGAP1 EP300 ENSG00000272834 ENSG00000232754 ENSG00000227413 XRCC6 L3MBTL2 NAGA EP300-AS1 ZC3H7B
GH22I040634 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 13.3 -48.3 -48304 4.4 HDGF PKNOX1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 POLR2B ZNF213 MKL1 EP300 XRCC6 PHF5A EP300-AS1 ENSG00000272834 RPL4P6 ENSG00000232754 DNAJB7 TNRC6B
GH22I041204 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 11.8 -617.5 -617533 1.8 HDGF PKNOX1 SMAD1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 POLR2B L3MBTL2 EP300 ENSG00000272834 ENSG00000232754 XRCC6 ENSG00000227413 NAGA EP300-AS1 RPL4P6 MKL1
GH22I041090 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.5 -504.8 -504843 4.7 HDGF FOXA2 SMAD1 MLX ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 EP300 MIR1281 PHF5A ENSG00000272834 L3MBTL2 XRCC6 LOC100506544 EP300-AS1 ENSG00000232754 ENSG00000227413
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL4P6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL4P6 Gene

Genomic Locations for RPL4P6 Gene
chr22:40,586,625-40,588,023
(GRCh38/hg38)
Size:
1,399 bases
Orientation:
Minus strand
chr22:40,982,629-40,984,027
(GRCh37/hg19)

Genomic View for RPL4P6 Gene

Genes around RPL4P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL4P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL4P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL4P6 Gene

Proteins for RPL4P6 Gene

Post-translational modifications for RPL4P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL4P6 Gene

Domains & Families for RPL4P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL4P6 Gene

Function for RPL4P6 Gene

Phenotypes From GWAS Catalog for RPL4P6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL4P6 Gene

Localization for RPL4P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL4P6 Gene

Pathways & Interactions for RPL4P6 Gene

SuperPathways for RPL4P6 Gene

No Data Available

Interacting Proteins for RPL4P6 Gene

Gene Ontology (GO) - Biological Process for RPL4P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL4P6 Gene

Drugs & Compounds for RPL4P6 Gene

No Compound Related Data Available

Transcripts for RPL4P6 Gene

mRNA/cDNA for RPL4P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL4P6 Gene

No ASD Table

Relevant External Links for RPL4P6 Gene

GeneLoc Exon Structure for
RPL4P6
ECgene alternative splicing isoforms for
RPL4P6

Expression for RPL4P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL4P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL4P6 Gene:

RPL4P6
genes like me logo Genes that share expression patterns with RPL4P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL4P6 Gene

Orthologs for RPL4P6 Gene

Evolution for RPL4P6 Gene

ENSEMBL:
Gene Tree for RPL4P6 (if available)
TreeFam:
Gene Tree for RPL4P6 (if available)

No data available for Orthologs for RPL4P6 Gene

Paralogs for RPL4P6 Gene

No data available for Paralogs for RPL4P6 Gene

Variants for RPL4P6 Gene

Additional Variant Information for RPL4P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL4P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL4P6 Gene

Disorders for RPL4P6 Gene

Additional Disease Information for RPL4P6

Genetic Association Database
(GAD)

No disorders were found for RPL4P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL4P6 Gene

Publications for RPL4P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Beyond single-marker analyses: mining whole genome scans for insights into treatment responses in severe sepsis. (PMID: 22310353) Man M … Garcia JG (The pharmacogenomics journal 2013) 44 58

Products for RPL4P6 Gene

Sources for RPL4P6 Gene

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