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Aliases for RPL4P6 Gene

Aliases for RPL4P6 Gene

  • Ribosomal Protein L4 Pseudogene 6 2 3 5
  • RPL4_4_1752 3

External Ids for RPL4P6 Gene

Previous GeneCards Identifiers for RPL4P6 Gene

  • GC22U900526
  • GC22M040983
  • GC22M040984

Summaries for RPL4P6 Gene

GeneCards Summary for RPL4P6 Gene

RPL4P6 (Ribosomal Protein L4 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL4P6 Gene

Genomics for RPL4P6 Gene

Regulatory Elements for RPL4P6 Gene

Enhancers for RPL4P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22G040650 2.1 FANTOM5 Ensembl ENCODE dbSUPER 4.7 -65.3 -65310 4.9 PKNOX1 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 ZNF766 XPNPEP3 GAPDHP37 MCHR1 LOC101927257 SLC25A17 ST13 PMM1 ADSL MKL1 RPL4P6
GH22G040634 1.4 ENCODE dbSUPER 4.8 -48.3 -48304 4.4 HDGF PKNOX1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF143 XRCC6 EP300 PHF5A ADSL EP300-AS1 LOC100313968 MKL1 XPNPEP3 CSDC2 RPL4P6
GH22G040484 1.2 Ensembl ENCODE dbSUPER 4.9 +101.6 101558 3.9 CTCF ZNF654 TRIM22 CEBPB REST RAD21 MAFF GLIS1 NBN SMC3 MKL1 ADSL LOC101927257 ENSG00000229999 SGSM3 ENSG00000272834 RPL4P6 ATF4 ENSG00000227413
GH22G040620 1.1 Ensembl ENCODE 5.2 -33.5 -33456 2.0 HDAC1 PKNOX1 TBL1XR1 ARNT TCF12 SCRT2 FOS ZNF280D CEBPB MEF2D MKL1 RPL4P6
GH22G040453 1.1 Ensembl ENCODE dbSUPER 4.7 +134.6 134557 0.7 NFIC NFIB ZNF571 ZIK1 BCL6B ZNF350 ZNF195 ZNF112 TRIM28 EP300 ENSG00000272834 MKL1 RPL4P6 ENSG00000227413 LOC101927257
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL4P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL4P6 Gene

Chromosome:
22
Start:
40,586,625 bp from pter
End:
40,588,023 bp from pter
Size:
1,399 bases
Orientation:
Minus strand

Genomic View for RPL4P6 Gene

Genes around RPL4P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL4P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL4P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL4P6 Gene

Proteins for RPL4P6 Gene

Post-translational modifications for RPL4P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL4P6 Gene

Domains & Families for RPL4P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL4P6 Gene

Function for RPL4P6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL4P6 Gene

Localization for RPL4P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL4P6 Gene

Pathways & Interactions for RPL4P6 Gene

SuperPathways for RPL4P6 Gene

No Data Available

Interacting Proteins for RPL4P6 Gene

Gene Ontology (GO) - Biological Process for RPL4P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL4P6 Gene

Drugs & Compounds for RPL4P6 Gene

No Compound Related Data Available

Transcripts for RPL4P6 Gene

mRNA/cDNA for RPL4P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL4P6 Gene

No ASD Table

Relevant External Links for RPL4P6 Gene

GeneLoc Exon Structure for
RPL4P6
ECgene alternative splicing isoforms for
RPL4P6

Expression for RPL4P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL4P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL4P6 Gene:

RPL4P6
genes like me logo Genes that share expression patterns with RPL4P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL4P6 Gene

Orthologs for RPL4P6 Gene

Evolution for RPL4P6 Gene

ENSEMBL:
Gene Tree for RPL4P6 (if available)
TreeFam:
Gene Tree for RPL4P6 (if available)

No data available for Orthologs for RPL4P6 Gene

Paralogs for RPL4P6 Gene

No data available for Paralogs for RPL4P6 Gene

Variants for RPL4P6 Gene

Relevant External Links for RPL4P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL4P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL4P6 Gene

Disorders for RPL4P6 Gene

Relevant External Links for RPL4P6

Genetic Association Database (GAD)
RPL4P6

No disorders were found for RPL4P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL4P6 Gene

Publications for RPL4P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Beyond single-marker analyses: mining whole genome scans for insights into treatment responses in severe sepsis. (PMID: 22310353) Man M. … Garcia J.G. (Pharmacogenomics J. 2013) 46 64

Products for RPL4P6 Gene

Sources for RPL4P6 Gene

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