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Aliases for RPL4P4 Gene

Aliases for RPL4P4 Gene

  • Ribosomal Protein L4 Pseudogene 4 2 3 5
  • RPL4_2_444 3

External Ids for RPL4P4 Gene

Previous GeneCards Identifiers for RPL4P4 Gene

  • GC03M186619
  • GC03M185136

Summaries for RPL4P4 Gene

GeneCards Summary for RPL4P4 Gene

RPL4P4 (Ribosomal Protein L4 Pseudogene 4) is a Pseudogene.

Additional gene information for RPL4P4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL4P4 Gene

Genomics for RPL4P4 Gene

GeneHancer (GH) Regulatory Elements for RPL4P4 Gene

Promoters and enhancers for RPL4P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I185418 Promoter 0.8 Ensembl 550.8 +0.1 142 0.2 ID3 ZBTB33 REST MLLT1 YY1 SPI1 RPL4P4 MAP3K13
GH03I185151 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 10.4 +266.0 265956 2 SIN3A YBX1 PLRG1 BMI1 ZNF335 ZNF207 EGR2 ZNF362 ZBTB11 ZNF512B C3orf70 TRA2B DVL3 VPS8 POLR2H RPL4P4 GC03P185005 GC03P185006 GC03P185008 PIR58156
GH03I185422 Enhancer 1 Ensembl ENCODE 0.8 -4.6 -4571 1.5 HDAC1 BACH1 ZIC2 RFX5 FOSL1 CTBP1 ZNF316 ELK1 NCOR1 PRDM10 EPHB3 RPL4P4 PIR32146 MAP3K13
GH03I185420 Enhancer 0.6 ENCODE 0.8 -2.2 -2187 0.3 EBF1 FEZF1 YY1 GATA3 IKZF1 PRDM1 RUNX3 SPI1 RPL4P4 PIR32146 MAP3K13
GH03I185361 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.2 +55.7 55654 3 PKNOX1 ATF1 FOXA2 SIN3A YY1 ATF7 RUNX3 MCM3 SP3 REST MAP3K13 TRA2B RPL4P4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL4P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL4P4 Gene

Genomic Locations for RPL4P4 Gene
chr3:185,417,408-185,418,843
(GRCh38/hg38)
Size:
1,436 bases
Orientation:
Minus strand
chr3:185,135,196-185,136,631
(GRCh37/hg19)

Genomic View for RPL4P4 Gene

Genes around RPL4P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL4P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL4P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL4P4 Gene

Proteins for RPL4P4 Gene

Post-translational modifications for RPL4P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL4P4 Gene

Domains & Families for RPL4P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL4P4 Gene

Function for RPL4P4 Gene

Phenotypes From GWAS Catalog for RPL4P4 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL4P4 Gene

Localization for RPL4P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL4P4 Gene

Pathways & Interactions for RPL4P4 Gene

SuperPathways for RPL4P4 Gene

No Data Available

Interacting Proteins for RPL4P4 Gene

Gene Ontology (GO) - Biological Process for RPL4P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL4P4 Gene

Drugs & Compounds for RPL4P4 Gene

No Compound Related Data Available

Transcripts for RPL4P4 Gene

mRNA/cDNA for RPL4P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL4P4 Gene

No ASD Table

Relevant External Links for RPL4P4 Gene

GeneLoc Exon Structure for
RPL4P4
ECgene alternative splicing isoforms for
RPL4P4

Expression for RPL4P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL4P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL4P4 Gene:

RPL4P4
genes like me logo Genes that share expression patterns with RPL4P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL4P4 Gene

Orthologs for RPL4P4 Gene

Evolution for RPL4P4 Gene

ENSEMBL:
Gene Tree for RPL4P4 (if available)
TreeFam:
Gene Tree for RPL4P4 (if available)

No data available for Orthologs for RPL4P4 Gene

Paralogs for RPL4P4 Gene

No data available for Paralogs for RPL4P4 Gene

Variants for RPL4P4 Gene

Additional Variant Information for RPL4P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL4P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL4P4 Gene

Disorders for RPL4P4 Gene

No disorders were found for RPL4P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL4P4 Gene

Publications for RPL4P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL4P4 Gene

Sources for RPL4P4 Gene

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