Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL41P5 Gene

Aliases for RPL41P5 Gene

  • Ribosomal Protein L41 Pseudogene 5 2 3 5
  • Ribosomal Protein L41-Like 2
  • RPL41L 3

External Ids for RPL41P5 Gene

Previous HGNC Symbols for RPL41P5 Gene

  • RPL41L

Previous GeneCards Identifiers for RPL41P5 Gene

  • GC12U900953
  • GC12M093477

Summaries for RPL41P5 Gene

GeneCards Summary for RPL41P5 Gene

RPL41P5 (Ribosomal Protein L41 Pseudogene 5) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL41P5 Gene

Genomics for RPL41P5 Gene

Regulatory Elements for RPL41P5 Gene

Enhancers for RPL41P5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F093108 1 Ensembl ENCODE 12.6 -25.7 -25685 1.6 HDGF CTCF PKNOX1 ARNT TAL1 BMI1 RAD21 ZNF664 ZNF316 ZFHX2 RPL41P5 GC12M093115 LOC105369908
GH12F093050 0.6 Ensembl 12 +33.3 33316 0.8 PKNOX1 L3MBTL2 RNF2 BHLHE40 BMI1 JUND CBX8 ZBTB48 SMARCA4 RPL41P5 GC12P093036
GH12F093048 0.2 ENCODE 12 +34.9 34897 0.1 ATF1 DMAP1 ZNF2 ZNF335 ZNF121 SMAD5 ZNF843 TGIF2 POLR2H ZNF524 RPL41P5 GC12P093036
GH12F093043 0.8 ENCODE 12 +39.8 39767 0.1 BCOR HDAC1 LEF1 ARNT TAL1 GATA2 NCOR1 TRIM24 HES1 SMARCE1 RPL41P5 GC12P093036
GH12F093042 0.5 ENCODE 12 +40.8 40780 1.6 PKNOX1 BMI1 ZNF366 CBX5 SCRT2 EED PRDM10 CREM RNF2 L3MBTL2 RPL41P5 GC12P093036
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL41P5 on UCSC Golden Path with GeneCards custom track

Promoters for RPL41P5 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001779849 215 599 SAP130 THAP11

Genomic Location for RPL41P5 Gene

Chromosome:
12
Start:
93,083,293 bp from pter
End:
93,083,716 bp from pter
Size:
424 bases
Orientation:
Minus strand

Genomic View for RPL41P5 Gene

Genes around RPL41P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL41P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL41P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL41P5 Gene

Proteins for RPL41P5 Gene

Post-translational modifications for RPL41P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL41P5 Gene

Domains & Families for RPL41P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL41P5 Gene

Function for RPL41P5 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL41P5 Gene

Localization for RPL41P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL41P5 Gene

Pathways & Interactions for RPL41P5 Gene

SuperPathways for RPL41P5 Gene

No Data Available

Interacting Proteins for RPL41P5 Gene

Gene Ontology (GO) - Biological Process for RPL41P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL41P5 Gene

Transcripts for RPL41P5 Gene

mRNA/cDNA for RPL41P5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL41P5 Gene

No ASD Table

Relevant External Links for RPL41P5 Gene

GeneLoc Exon Structure for
RPL41P5
ECgene alternative splicing isoforms for
RPL41P5

Expression for RPL41P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL41P5 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL41P5 Gene:

RPL41P5
genes like me logo Genes that share expression patterns with RPL41P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL41P5 Gene

Orthologs for RPL41P5 Gene

Evolution for RPL41P5 Gene

ENSEMBL:
Gene Tree for RPL41P5 (if available)
TreeFam:
Gene Tree for RPL41P5 (if available)

No data available for Orthologs for RPL41P5 Gene

Paralogs for RPL41P5 Gene

No data available for Paralogs for RPL41P5 Gene

Variants for RPL41P5 Gene

Relevant External Links for RPL41P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL41P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL41P5 Gene

Disorders for RPL41P5 Gene

Relevant External Links for RPL41P5

Genetic Association Database (GAD)
RPL41P5
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RPL41P5

No disorders were found for RPL41P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL41P5 Gene

Publications for RPL41P5 Gene

  1. 7B6, a ubiquitous mRNA: with significant homology to L41 human ribosomal protein RNA. (PMID: 8332507) Francis S.E. … Duff G.W. (Nucleic Acids Res. 1993) 2 3 64
  2. Genome-wide association study identifies variants associated with histologic features of nonalcoholic Fatty liver disease. (PMID: 20708005) Chalasani N. … Rotter J.I. (Gastroenterology 2010) 46 64

Products for RPL41P5 Gene

Sources for RPL41P5 Gene

Content
Loading form....