Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL3P6 Gene

Aliases for RPL3P6 Gene

  • Ribosomal Protein L3 Pseudogene 6 2 3 5
  • RPL3_2_568 3

External Ids for RPL3P6 Gene

Previous GeneCards Identifiers for RPL3P6 Gene

  • GC05M060724

Summaries for RPL3P6 Gene

GeneCards Summary for RPL3P6 Gene

RPL3P6 (Ribosomal Protein L3 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL3P6 Gene

Genomics for RPL3P6 Gene

Regulatory Elements for RPL3P6 Gene

Enhancers for RPL3P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F061401 1.1 Ensembl ENCODE 0.4 -10.8 -10804 2.2 TBP CTCF PKNOX1 SAP130 TAL1 SIN3A ZNF335 FOSL1 ZBTB48 POLR2A RNU6-913P RPL3P6 PIR59746
GH05F061407 1.4 Ensembl ENCODE 0.3 -17.2 -17220 3.0 HDGF PKNOX1 ARNT ARID4B SIN3A FEZF1 ZNF2 YY1 ZNF143 FOS LOC100421561 RNU6-913P ERCC8 RPL3P6 PIR59746
GH05F061404 1 ENCODE 0.4 -13.7 -13741 2.1 ATF1 CREB3L1 ZFP64 SIN3A DMAP1 ZNF2 GLIS2 ZNF263 SP3 MXD4 LOC100421561 RPL3P6 PIR59746
GH05F061415 0.7 Ensembl ENCODE 0.3 -24.3 -24304 1.6 ZNF146 RAD21 ZSWIM6 RPL3P6 PIR59746
GH05F061423 0.5 Ensembl 0.3 -32.0 -32004 1.4 ZNF202 CEBPB PRDM1 RNU6-913P PIR59746 RPL3P6
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL3P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL3P6 Gene

Chromosome:
5
Start:
61,390,616 bp from pter
End:
61,391,897 bp from pter
Size:
1,282 bases
Orientation:
Minus strand

Genomic View for RPL3P6 Gene

Genes around RPL3P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL3P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL3P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL3P6 Gene

Proteins for RPL3P6 Gene

Post-translational modifications for RPL3P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL3P6 Gene

Domains & Families for RPL3P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL3P6 Gene

Function for RPL3P6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL3P6 Gene

Localization for RPL3P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL3P6 Gene

Pathways & Interactions for RPL3P6 Gene

SuperPathways for RPL3P6 Gene

No Data Available

Interacting Proteins for RPL3P6 Gene

Gene Ontology (GO) - Biological Process for RPL3P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL3P6 Gene

Transcripts for RPL3P6 Gene

mRNA/cDNA for RPL3P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL3P6 Gene

No ASD Table

Relevant External Links for RPL3P6 Gene

GeneLoc Exon Structure for
RPL3P6
ECgene alternative splicing isoforms for
RPL3P6

Expression for RPL3P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL3P6 Gene

mRNA differential expression in normal tissues according to GTEx for RPL3P6 Gene

This gene is overexpressed in Whole Blood (x4.3).

NURSA nuclear receptor signaling pathways regulating expression of RPL3P6 Gene:

RPL3P6
genes like me logo Genes that share expression patterns with RPL3P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL3P6 Gene

Orthologs for RPL3P6 Gene

Evolution for RPL3P6 Gene

ENSEMBL:
Gene Tree for RPL3P6 (if available)
TreeFam:
Gene Tree for RPL3P6 (if available)

No data available for Orthologs for RPL3P6 Gene

Paralogs for RPL3P6 Gene

No data available for Paralogs for RPL3P6 Gene

Variants for RPL3P6 Gene

Relevant External Links for RPL3P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL3P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL3P6 Gene

Disorders for RPL3P6 Gene

Relevant External Links for RPL3P6

Genetic Association Database (GAD)
RPL3P6

No disorders were found for RPL3P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL3P6 Gene

Publications for RPL3P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 46 64

Products for RPL3P6 Gene

Sources for RPL3P6 Gene

Content
Loading form....