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Aliases for RPL3P2 Gene

Aliases for RPL3P2 Gene

  • Ribosomal Protein L3 Pseudogene 2 2 3 5
  • Ribosomal Protein L3 Homologous 3
  • RPL3_1_679 3
  • RPL3-Hom 3

External Ids for RPL3P2 Gene

Previous GeneCards Identifiers for RPL3P2 Gene

  • GC06U990296
  • GC06Pf31380
  • GC06Pc31386
  • GC06P031249
  • GC06P031048
  • GC06Pj31240
  • GC06P031253
  • GC06P031257

Summaries for RPL3P2 Gene

GeneCards Summary for RPL3P2 Gene

RPL3P2 (Ribosomal Protein L3 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL3P2 Gene

Genomics for RPL3P2 Gene

Regulatory Elements for RPL3P2 Gene

Enhancers for RPL3P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G031619 1.4 ENCODE dbSUPER 32.5 +340.9 340937 4.0 CREB3L1 AGO1 ZFP64 FEZF1 DMAP1 YBX1 YY1 ZNF143 ZNF263 SP3 LSM2 ATF6B LY6G5B DDX39B PPT2 NFKBIL1 RPL3P2 EGFL8 SKIV2L BAG6
GH06G031538 1.4 ENCODE dbSUPER 31.6 +260.8 260848 4.9 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 ZNF143 ZNF263 SP3 MCM3 LSM2 DDX39B ATF6B LY6G5B PPP1R10 DHX16 RPL3P2 SKIV2L ATP6V1G2 MICB
GH06G031567 2.1 FANTOM5 Ensembl ENCODE dbSUPER 20.8 +298.1 298128 22.2 CREB3L1 MLX AGO1 ZFP64 DMAP1 FEZF1 YBX1 YY1 SLC30A9 ZNF143 DDX39B TNF LY6G5B LSM2 DHX16 ATF6B TCF19 PPP1R10 VARS CSNK2B
GH06G030746 2.1 FANTOM5 Ensembl ENCODE dbSUPER 19.7 -528.9 -528864 9.5 CREB3L1 MLX AGO1 ZFP64 DMAP1 FEZF1 YY1 SLC30A9 ZNF143 ZNF548 IER3 DHX16 LY6G5B GTF2H4 DDX39B PPP1R10 PAIP1P1 ABCF1 HLA-K VARS2
GH06G031353 1.8 FANTOM5 Ensembl ENCODE dbSUPER 21.1 +75.9 75901 7.0 HDGF PKNOX1 ATF1 ZNF493 WRNIP1 ZFP64 SIN3A NSD2 ZNF2 GLIS2 HLA-C LY6G5B CCHCR1 PPT2 LSM2 ATF6B DDX39B HLA-B ENSG00000271581 TCF19
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL3P2 on UCSC Golden Path with GeneCards custom track

Promoters for RPL3P2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000195524 110 399 ATF3 CEBPG

Genomic Location for RPL3P2 Gene

Chromosome:
6
Start:
31,280,291 bp from pter
End:
31,281,571 bp from pter
Size:
1,281 bases
Orientation:
Plus strand

Genomic View for RPL3P2 Gene

Genes around RPL3P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL3P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL3P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for RPL3P2 Gene

Post-translational modifications for RPL3P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL3P2 Gene

Domains & Families for RPL3P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL3P2 Gene

Function for RPL3P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL3P2 Gene

Localization for RPL3P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL3P2 Gene

Pathways & Interactions for RPL3P2 Gene

SuperPathways for RPL3P2 Gene

No Data Available

Interacting Proteins for RPL3P2 Gene

Gene Ontology (GO) - Biological Process for RPL3P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL3P2 Gene

Drugs & Compounds for RPL3P2 Gene

No Compound Related Data Available

Transcripts for RPL3P2 Gene

mRNA/cDNA for RPL3P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL3P2 Gene

No ASD Table

Relevant External Links for RPL3P2 Gene

GeneLoc Exon Structure for
RPL3P2
ECgene alternative splicing isoforms for
RPL3P2

Expression for RPL3P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL3P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL3P2 Gene:

RPL3P2
genes like me logo Genes that share expression patterns with RPL3P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL3P2 Gene

Orthologs for RPL3P2 Gene

Evolution for RPL3P2 Gene

ENSEMBL:
Gene Tree for RPL3P2 (if available)
TreeFam:
Gene Tree for RPL3P2 (if available)

No data available for Orthologs for RPL3P2 Gene

Paralogs for RPL3P2 Gene

No data available for Paralogs for RPL3P2 Gene

Variants for RPL3P2 Gene

Relevant External Links for RPL3P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL3P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL3P2 Gene

Disorders for RPL3P2 Gene

Relevant External Links for RPL3P2

Genetic Association Database (GAD)
RPL3P2

No disorders were found for RPL3P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL3P2 Gene

Publications for RPL3P2 Gene

  1. Nucleotide sequence analysis of the HLA class I region spanning the 237-kb segment around the HLA-B and -C genes. (PMID: 9177776) Mizuki N. … Inoko H. (Genomics 1997) 2 3 22 64
  2. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  3. Quantitative trait loci for CD4:CD8 lymphocyte ratio are associated with risk of type 1 diabetes and HIV-1 immune control. (PMID: 20045101) Ferreira M.A. … Martin N.G. (Am. J. Hum. Genet. 2010) 46 64
  4. Genome-wide association study identifies variants in the MHC class I, IL10, and IL23R-IL12RB2 regions associated with BehAset's disease. (PMID: 20622878) Remmers E.F. … GA1l A. (Nat. Genet. 2010) 46 64
  5. Genome-wide association study identifies a psoriasis susceptibility locus at TRAF3IP2. (PMID: 20953188) Ellinghaus E. … Franke A. (Nat. Genet. 2010) 46 64

Products for RPL3P2 Gene

Sources for RPL3P2 Gene

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