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Aliases for RPL3P2 Gene

Aliases for RPL3P2 Gene

  • Ribosomal Protein L3 Pseudogene 2 2 3 5
  • Ribosomal Protein L3 Homologous 3
  • RPL3_1_679 3
  • RPL3-Hom 3

External Ids for RPL3P2 Gene

Previous GeneCards Identifiers for RPL3P2 Gene

  • GC06U990296
  • GC06Pf31380
  • GC06Pc31386
  • GC06P031249
  • GC06P031048
  • GC06Pj31240
  • GC06P031253
  • GC06P031257
  • GC06P031260

Summaries for RPL3P2 Gene

GeneCards Summary for RPL3P2 Gene

RPL3P2 (Ribosomal Protein L3 Pseudogene 2) is a Pseudogene.

Additional gene information for RPL3P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL3P2 Gene

Genomics for RPL3P2 Gene

Regulatory Elements for RPL3P2 Gene

Enhancers for RPL3P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H031538 1.4 ENCODE dbSUPER 40.1 +260.8 260848 4 MLX ZFP64 FEZF1 DMAP1 YY1 ZNF143 SP3 MCM3 PPARGC1A MEF2D ATF6B LSM2 LY6G5B DDX39B MDC1 PPP1R10 NRM DHX16 MSH5 TCF19
GH06H030611 1.7 Ensembl ENCODE dbSUPER 33 -664.7 -664739 8 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC MEF2D SSRP1 MDC1 DDX39B TRIM39 PPP1R10 ABCF1 NRM DHX16 ZNRD1 GTF2H4 TRIM26
GH06H031567 2 FANTOM5 Ensembl ENCODE dbSUPER 22.9 +298.1 298128 22 HDGF PKNOX1 MLX ZFP64 ARID4B SIN3A DMAP1 YBX1 ZNF2 ZBTB7B TNF DDX39B LY6G5B ATF6B LSM2 TCF19 MDC1 DHX16 NFKBIL1 C6orf47
GH06H031733 1.9 FANTOM5 ENCODE dbSUPER 20.5 +457.2 457164 8 MLX ZFP64 YBX1 FEZF1 DMAP1 YY1 SLC30A9 SP3 NFYC ZC3H11A LY6G5B ATF6B DDX39B LSM2 CSNK2B GPANK1 VARS NFKBIL1 SKIV2L MSH5
GH06H031817 1.7 FANTOM5 ENCODE dbSUPER 21.9 +542.5 542489 10 ZFP64 DMAP1 YY1 SP3 NFYC ZC3H11A PPARGC1A MEF2D SSRP1 ZNF610 BAG6 ATF6B GPANK1 LSM2 DDX39B VARS CSNK2B SKIV2L LY6G5B RPL3P2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL3P2 on UCSC Golden Path with GeneCards custom track

Promoters for RPL3P2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000195524 110 399

Genomic Location for RPL3P2 Gene

Chromosome:
6
Start:
31,280,291 bp from pter
End:
31,281,571 bp from pter
Size:
1,281 bases
Orientation:
Plus strand

Genomic View for RPL3P2 Gene

Genes around RPL3P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL3P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL3P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for RPL3P2 Gene

Post-translational modifications for RPL3P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL3P2 Gene

Domains & Families for RPL3P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL3P2 Gene

Function for RPL3P2 Gene

Phenotypes From GWAS Catalog for RPL3P2 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL3P2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL3P2 Gene

Localization for RPL3P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL3P2 Gene

Pathways & Interactions for RPL3P2 Gene

SuperPathways for RPL3P2 Gene

No Data Available

Interacting Proteins for RPL3P2 Gene

Gene Ontology (GO) - Biological Process for RPL3P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL3P2 Gene

Drugs & Compounds for RPL3P2 Gene

No Compound Related Data Available

Transcripts for RPL3P2 Gene

mRNA/cDNA for RPL3P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL3P2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL3P2 Gene

No ASD Table

Relevant External Links for RPL3P2 Gene

GeneLoc Exon Structure for
RPL3P2
ECgene alternative splicing isoforms for
RPL3P2

Expression for RPL3P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL3P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL3P2 Gene:

RPL3P2
genes like me logo Genes that share expression patterns with RPL3P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL3P2 Gene

Orthologs for RPL3P2 Gene

Evolution for RPL3P2 Gene

ENSEMBL:
Gene Tree for RPL3P2 (if available)
TreeFam:
Gene Tree for RPL3P2 (if available)

No data available for Orthologs for RPL3P2 Gene

Paralogs for RPL3P2 Gene

No data available for Paralogs for RPL3P2 Gene

Variants for RPL3P2 Gene

Relevant External Links for RPL3P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL3P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL3P2 Gene

Disorders for RPL3P2 Gene

Relevant External Links for RPL3P2

Genetic Association Database (GAD)
RPL3P2

No disorders were found for RPL3P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL3P2 Gene

Publications for RPL3P2 Gene

  1. Nucleotide sequence analysis of the HLA class I region spanning the 237-kb segment around the HLA-B and -C genes. (PMID: 9177776) Mizuki N … Inoko H (Genomics 1997) 2 3 22 60
  2. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  3. Genome-wide association study identifies variants in the MHC class I, IL10, and IL23R-IL12RB2 regions associated with Behçet's disease. (PMID: 20622878) Remmers EF … Gül A (Nature genetics 2010) 45 60
  4. Genome-wide association study identifies a psoriasis susceptibility locus at TRAF3IP2. (PMID: 20953188) Ellinghaus E … Franke A (Nature genetics 2010) 45 60
  5. Quantitative trait loci for CD4:CD8 lymphocyte ratio are associated with risk of type 1 diabetes and HIV-1 immune control. (PMID: 20045101) Ferreira MA … Martin NG (American journal of human genetics 2010) 45 60

Products for RPL3P2 Gene

Sources for RPL3P2 Gene

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