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Aliases for RPL3P2 Gene

Aliases for RPL3P2 Gene

  • Ribosomal Protein L3 Pseudogene 2 2 3 5
  • Ribosomal Protein L3 Homologous 3
  • RPL3_1_679 3
  • RPL3-Hom 3

External Ids for RPL3P2 Gene

Previous GeneCards Identifiers for RPL3P2 Gene

  • GC06U990296
  • GC06Pf31380
  • GC06Pc31386
  • GC06P031249
  • GC06P031048
  • GC06Pj31240
  • GC06P031253
  • GC06P031257
  • GC06P031260

Summaries for RPL3P2 Gene

GeneCards Summary for RPL3P2 Gene

RPL3P2 (Ribosomal Protein L3 Pseudogene 2) is a Pseudogene.

Additional gene information for RPL3P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL3P2 Gene

Genomics for RPL3P2 Gene

GeneHancer (GH) Regulatory Elements for RPL3P2 Gene

Promoters and enhancers for RPL3P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I031280 Promoter 0.5 Ensembl 550.8 +0.1 110 0.4 RPL3P2 HLA-C PSORS1C3 POU5F1 WASF5P HLA-B
GH06I031538 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 50.9 +260.8 260848 4.9 MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 ZNF263 DDX39B DDX39B-AS1 GC06M031542 GC06M031543 GC06M031550 GC06M031555 GC06M031573 GC06M031962 GC06M031965 GC06M031970
GH06I030611 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 43.8 -664.7 -664739 8.7 CLOCK MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 PPP1R10 MRPS18B DDX39B MDC1 TRIM39 ABCF1 NRM DHX16 ZNRD1 TRIM26
GH06I031813 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 32.7 +545.6 545585 25.6 CLOCK ZFP64 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 C6orf48 HSPA1B HSPA1A HSPA1L GC06P032039 ATF6B DDX39B LY6G5B LSM2 BAG6
GH06I031733 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 31.4 +457.2 457164 8.5 CLOCK MLX ZFP64 YBX1 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 MSH5 CLIC1 DDX39B LY6G5B ATF6B LSM2 CSNK2B SKIV2L GPANK1 BAG6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL3P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL3P2 Gene

Genomic Locations for RPL3P2 Gene
chr6:31,280,291-31,281,571
(GRCh38/hg38)
Size:
1,281 bases
Orientation:
Plus strand
chr6:31,248,068-31,249,348
(GRCh37/hg19)

Genomic View for RPL3P2 Gene

Genes around RPL3P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL3P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL3P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for RPL3P2 Gene

Post-translational modifications for RPL3P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL3P2 Gene

Domains & Families for RPL3P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL3P2 Gene

Function for RPL3P2 Gene

Phenotypes From GWAS Catalog for RPL3P2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL3P2 Gene

Localization for RPL3P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL3P2 Gene

Pathways & Interactions for RPL3P2 Gene

SuperPathways for RPL3P2 Gene

No Data Available

Interacting Proteins for RPL3P2 Gene

Gene Ontology (GO) - Biological Process for RPL3P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL3P2 Gene

Drugs & Compounds for RPL3P2 Gene

No Compound Related Data Available

Transcripts for RPL3P2 Gene

mRNA/cDNA for RPL3P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL3P2 Gene

No ASD Table

Relevant External Links for RPL3P2 Gene

GeneLoc Exon Structure for
RPL3P2
ECgene alternative splicing isoforms for
RPL3P2

Expression for RPL3P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL3P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL3P2 Gene:

RPL3P2
genes like me logo Genes that share expression patterns with RPL3P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL3P2 Gene

Orthologs for RPL3P2 Gene

Evolution for RPL3P2 Gene

ENSEMBL:
Gene Tree for RPL3P2 (if available)
TreeFam:
Gene Tree for RPL3P2 (if available)

No data available for Orthologs for RPL3P2 Gene

Paralogs for RPL3P2 Gene

No data available for Paralogs for RPL3P2 Gene

Variants for RPL3P2 Gene

Additional Variant Information for RPL3P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL3P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL3P2 Gene

Disorders for RPL3P2 Gene

Additional Disease Information for RPL3P2

Genetic Association Database
(GAD)

No disorders were found for RPL3P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL3P2 Gene

Publications for RPL3P2 Gene

  1. Nucleotide sequence analysis of the HLA class I region spanning the 237-kb segment around the HLA-B and -C genes. (PMID: 9177776) Mizuki N … Inoko H (Genomics 1997) 2 3 22 58
  2. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  3. Genome-wide association study identifies variants in the MHC class I, IL10, and IL23R-IL12RB2 regions associated with Behçet's disease. (PMID: 20622878) Remmers EF … Gül A (Nature genetics 2010) 44 58
  4. Quantitative trait loci for CD4:CD8 lymphocyte ratio are associated with risk of type 1 diabetes and HIV-1 immune control. (PMID: 20045101) Ferreira MA … Martin NG (American journal of human genetics 2010) 44 58
  5. Genome-wide association study identifies a psoriasis susceptibility locus at TRAF3IP2. (PMID: 20953188) Ellinghaus E … Franke A (Nature genetics 2010) 44 58

Products for RPL3P2 Gene

Sources for RPL3P2 Gene

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