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Aliases for RPL3P13 Gene

Subcategory (RNA class) for RPL3P13 Gene

lncRNA

Aliases for RPL3P13 Gene

  • Ribosomal Protein L3 Pseudogene 13 2 3 5

External Ids for RPL3P13 Gene

ORGUL Members for RPL3P13 Gene

Previous GeneCards Identifiers for RPL3P13 Gene

  • GC04M085466
  • GC00U935618

Summaries for RPL3P13 Gene

GeneCards Summary for RPL3P13 Gene

RPL3P13 (Ribosomal Protein L3 Pseudogene 13) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL3P13 Gene

Genomics for RPL3P13 Gene

Regulatory Elements for RPL3P13 Gene

Enhancers for RPL3P13 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04G084573 1 FANTOM5 Ensembl 0.3 -29.5 -29482 1.6 FOSL1 MAFF ZNF316 PBX2 MAFG EMSY MAFK CDS1 RPL3P13
GH04G084531 0.7 ENCODE 0.4 +12.9 12890 1.1 ESRRA PKNOX1 FEZF1 ZBTB40 CTBP1 GATA3 FOS TCF7L2 ZNF263 GFI1B CDS1 NKX6-1 WDFY3-AS2 RPL3P13
GH04G084500 0.9 ENCODE dbSUPER 0.3 +44.7 44717 0.2 ZFHX2 ZBTB48 CBX2 SP2 PRDM10 ZNF501 ZBTB26 EGR2 NKX6-1 RPL3P13
GH04G084499 1 ENCODE dbSUPER 0.2 +45.0 45007 0.2 HDGF PKNOX1 ZBTB21 RBBP5 ZFHX2 GLIS2 ZBTB48 PATZ1 KLF8 EZH2 NKX6-1 RPL3P13
GH04G084566 0.6 ENCODE 0.3 -21.6 -21644 0.2 ZNF335 ATF3 MAX POU5F1 CTBP2 ZBTB20 CDS1 RPL3P13
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL3P13 on UCSC Golden Path with GeneCards custom track

Promoters for RPL3P13 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000170168 -245 1601 PKNOX1 ATF1 ZFP64 ARID4B SIN3A FEZF1 GLIS2 FOS ZNF263 SP3

Genomic Location for RPL3P13 Gene

Chromosome:
4
Start:
84,544,304 bp from pter
End:
84,544,519 bp from pter
Size:
216 bases
Orientation:
Minus strand

Genomic View for RPL3P13 Gene

Genes around RPL3P13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL3P13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL3P13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL3P13 Gene

Proteins for RPL3P13 Gene

Post-translational modifications for RPL3P13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL3P13 Gene

Domains & Families for RPL3P13 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL3P13 Gene

Function for RPL3P13 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL3P13 Gene

Localization for RPL3P13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL3P13 Gene

Pathways & Interactions for RPL3P13 Gene

SuperPathways for RPL3P13 Gene

No Data Available

Interacting Proteins for RPL3P13 Gene

Gene Ontology (GO) - Biological Process for RPL3P13 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL3P13 Gene

Drugs & Compounds for RPL3P13 Gene

No Compound Related Data Available

Transcripts for RPL3P13 Gene

mRNA/cDNA for RPL3P13 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL3P13 Gene

No ASD Table

Relevant External Links for RPL3P13 Gene

GeneLoc Exon Structure for
RPL3P13
ECgene alternative splicing isoforms for
RPL3P13

Expression for RPL3P13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL3P13 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL3P13 Gene:

RPL3P13
genes like me logo Genes that share expression patterns with RPL3P13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL3P13 Gene

Orthologs for RPL3P13 Gene

Evolution for RPL3P13 Gene

ENSEMBL:
Gene Tree for RPL3P13 (if available)
TreeFam:
Gene Tree for RPL3P13 (if available)

No data available for Orthologs for RPL3P13 Gene

Paralogs for RPL3P13 Gene

No data available for Paralogs for RPL3P13 Gene

Variants for RPL3P13 Gene

Relevant External Links for RPL3P13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL3P13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL3P13 Gene

Disorders for RPL3P13 Gene

No disorders were found for RPL3P13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL3P13 Gene

Publications for RPL3P13 Gene

No publications were found for RPL3P13 Gene.

Products for RPL3P13 Gene

Sources for RPL3P13 Gene

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