Aliases for RPL3P1 Gene
Aliases for RPL3P1 Gene
External Ids for RPL3P1 Gene
- HGNC: 10352
- Entrez Gene: 8488
- Ensembl: ENSG00000228149
Previous HGNC Symbols for RPL3P1 Gene
- RPL3P
Previous GeneCards Identifiers for RPL3P1 Gene
- GC21P034118
- GC21P034201
- GC21P036461
- GC21P036463
- GC21M037542
- GC21M023018
Summaries for RPL3P1 Gene
GeneCards Summary for RPL3P1 Gene
RPL3P1 (Ribosomal Protein L3 Pseudogene 1) is a Pseudogene.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL3P1 Gene
Genomics for RPL3P1 Gene
Regulatory Elements for RPL3P1 Gene
Enhancers for RPL3P1 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH21G036166 | 1 | ENCODE dbSUPER | 0.7 | +3.2 | 3219 | 0.9 | ESRRA PKNOX1 ZNF146 TAL1 ZMYM3 FEZF1 RBBP5 GATA3 POLR2A GATA2 | DOPEY2 CBR3 RPL3P1 |
| GH21G036162 | 1.5 | Ensembl ENCODE dbSUPER | 0.4 | +6.4 | 6386 | 1.9 | ATF1 FOXA2 MLX CREB3L1 ARID4B CBX5 KLF13 SP5 NCOA1 MXD4 | DOPEY2 CBR3 RPL3P1 |
| GH21G036165 | 0.6 | dbSUPER | 0.7 | +4.7 | 4723 | 0.4 | ZNF639 ATF3 ADNP GTF2E2 ZSCAN4 ID3 REPIN1 ZNF644 | CBR3 RPL3P1 DOPEY2 |
| GH21G036171 | 0.5 | Ensembl | 0.7 | -1.9 | -1895 | 0.6 | ATF3 CEBPG NR2F2 | DOPEY2 CBR3 GC21M036173 RPL3P1 GC21M036172 |
| GH21G036159 | 0.8 | ENCODE dbSUPER | 0.4 | +10.6 | 10569 | 0.6 | ZFP41 CEBPB MAX EMSY MYC | DOPEY2 CBR3 ENSG00000228107 RPL3P1 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around RPL3P1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for RPL3P1 Gene
- Chromosome:
- 21
- Start:
- 36,168,921 bp from pter
- End:
- 36,170,206 bp from pter
- Size:
- 1,286 bases
- Orientation:
- Minus strand
Genomic View for RPL3P1 Gene
Genes around RPL3P1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 21q22.12 by Ensembl
- 21q22.12 by Entrez Gene
- 21q22.12 by HGNC
RPL3P1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RPL3P1 Gene
Proteins for RPL3P1 Gene
Post-translational modifications for RPL3P1 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for RPL3P1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL3P1
- Origene Custom Protein Services for RPL3P1
- Search GeneTex for Proteins for RPL3P1
No data available for DME Specific Peptides for RPL3P1 Gene
Domains & Families for RPL3P1 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL3P1 Gene
Function for RPL3P1 Gene
Molecular function for RPL3P1 Gene
- GENATLAS Biochemistry:
- 60S ribosomal protein L3,pseudogene 1
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for RPL3P1
-
- Search ViGene Biosciences for RPL3P1
miRNA Products
- Search ViGene Biosciences for RPL3P1
Inhibitory RNA Products
- Search ViGene Biosciences for RPL3P1
Clone Products
- GenScript: Custom all cDNA clones Services for RPL3P1
- VectorBuilder custom plasmid, inducible vectors for RPL3P1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for RPL3P1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL3P1 Gene
Localization for RPL3P1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL3P1 Gene
Transcripts for RPL3P1 Gene
mRNA/cDNA for RPL3P1 Gene
- (1) Selected AceView cDNA sequences:
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
miRNA Products
- Search ViGene Biosciences for RPL3P1
Inhibitory RNA Products
- Search ViGene Biosciences for RPL3P1
Clone Products
- GenScript: Custom all cDNA clones Services for RPL3P1
- VectorBuilder custom plasmid, inducible vectors for RPL3P1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for RPL3P1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Expression for RPL3P1 Gene
mRNA differential expression in normal tissues according to GTEx for RPL3P1 Gene
This gene is overexpressed in Brain - Cerebellum (x6.9).
NURSA nuclear receptor signaling pathways regulating expression of RPL3P1 Gene:
RPL3P1
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL3P1 Gene
Orthologs for RPL3P1 Gene
No data available for Orthologs for RPL3P1 Gene
Paralogs for RPL3P1 Gene
No data available for Paralogs for RPL3P1 Gene
Variants for RPL3P1 Gene
Relevant External Links for RPL3P1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RPL3P1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL3P1 Gene
Disorders for RPL3P1 Gene
No disorders were found for RPL3P1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL3P1 Gene
Publications for RPL3P1 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
- Mapping of a novel human carbonyl reductase, CBR3, and ribosomal pseudogenes to human chromosome 21q22.2. (PMID: 9740676) Watanabe K. … Nomura T. (Genomics 1998) 2 3 64
- The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M. … Yaspo M.-L. (Nature 2000) 3 64
Products for RPL3P1 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
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- Browse cDNA Clones
- Browse Cell Culture Products
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- Browse Proteome Profiler Antibody Arrays
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- Browse OriGene Antibodies
- Custom Antibody Services
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- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL3P1
- Origene Custom Protein Services for RPL3P1
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- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RPL3P1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RPL3P1
- GenScript: Custom all cDNA clones Services for RPL3P1
- GenScript Custom Purified and Recombinant Proteins Services for RPL3P1
- GenScript Custom Assay Services for RPL3P1
- GenScript Custom overexpressing Cell Line Services for RPL3P1
- Browse GenScript CRISPR for RPL3P1
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
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- Gene Mutant Library, Variants up to 10^11
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- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Browse Antibodies at Cloud-Clone Corp.
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- Browse Knockouts at Cloud-Clone Corp.
- Browse Knockins at Cloud-Clone Corp.
- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Search GeneTex for Antibodies for RPL3P1
- Search GeneTex for Proteins for RPL3P1
- Search ViGene Biosciences for RPL3P1
- Cyagen custom Knockout/knockin (KOKI) mouse models for RPL3P1
- VectorBuilder custom plasmid, inducible vectors for RPL3P1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for RPL3P1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for RPL3P1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus Biologicals
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer
- (156) abm
- (157) CrownBio