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RPL3P1 Gene(Pseudogene)

Ribosomal Protein L3 Pseudogene 1

GCID:
GC21M036168
GIFtS:
12
Genes Participants
UDN Logo

Aliases for RPL3P1 Gene

Aliases for RPL3P1 Gene

  • Ribosomal Protein L3 Pseudogene 1 2 3 5
  • Ribosomal Protein L3 Pseudogene 2
  • RPL3_8_1731 3
  • RPL3P 3

External Ids for RPL3P1 Gene

Previous HGNC Symbols for RPL3P1 Gene

  • RPL3P

Previous GeneCards Identifiers for RPL3P1 Gene

  • GC21P034118
  • GC21P034201
  • GC21P036461
  • GC21P036463
  • GC21M037542
  • GC21M023018

Summaries for RPL3P1 Gene

GeneCards Summary for RPL3P1 Gene

RPL3P1 (Ribosomal Protein L3 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL3P1 Gene

Genomics for RPL3P1 Gene

Products:

  1. Regulatory Element

Regulatory Elements for RPL3P1 Gene

Enhancers for RPL3P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21F036166 0.7 ENCODE 0.8 +3.2 3219 0.9 ESRRA ZNF146 PKNOX1 TAL1 BHLHE40 ZMYM3 FEZF1 ARID1B GATA3 SMARCA4 DOPEY2 CBR3 RPL3P1
GH21F036162 1.2 Ensembl ENCODE 0.4 +6.4 6425 2.0 ATF1 MLX CREB3L1 ARID4B CBX5 KLF13 SP5 MXD4 NCOA1 MIER2 DOPEY2 CBR3 RPL3P1
GH21F036171 0.5 Ensembl 0.8 -2.0 -1995 0.8 ATF3 CEBPB CEBPG NR2F2 DOPEY2 CBR3 GC21M036172 RPL3P1 GC21M036173
GH21F036159 0.6 ENCODE 0.4 +10.6 10569 0.6 ZFP41 MAX CEBPB EMSY MYC DOPEY2 CBR3 ENSG00000228107 RPL3P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL3P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL3P1 Gene

Chromosome:
21
Start:
36,168,921 bp from pter
End:
36,170,206 bp from pter
Size:
1,286 bases
Orientation:
Minus strand

Genomic View for RPL3P1 Gene

Genes around RPL3P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL3P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL3P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPL3P1 Gene

Proteins for RPL3P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPL3P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL3P1 Gene

Domains & Families for RPL3P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL3P1 Gene

Function for RPL3P1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Molecular function for RPL3P1 Gene

GENATLAS Biochemistry:
60S ribosomal protein L3,pseudogene 1

Animal Model Products

Clone Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL3P1 Gene

Localization for RPL3P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL3P1 Gene

Pathways & Interactions for RPL3P1 Gene

SuperPathways for RPL3P1 Gene

PathCards logo More details on SuperPathways for RPL3P1
No Data Available

Interacting Proteins for RPL3P1 Gene

Gene Ontology (GO) - Biological Process for RPL3P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL3P1 Gene

Drugs & Compounds for RPL3P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPL3P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for RPL3P1 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL3P1 Gene

No ASD Table

Relevant External Links for RPL3P1 Gene

GeneLoc Exon Structure for
RPL3P1
ECgene alternative splicing isoforms for
RPL3P1

Expression for RPL3P1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL3P1 Gene

mRNA expression in normal human tissues for RPL3P1 Gene
mRNA expression by GTEx for RPL3P1 Gene

mRNA differential expression in normal tissues according to GTEx for RPL3P1 Gene

This gene is overexpressed in Brain - Cerebellum (x6.9).

NURSA nuclear receptor signaling pathways regulating expression of RPL3P1 Gene:

RPL3P1
genes like me logo Genes that share expression patterns with RPL3P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL3P1 Gene

Orthologs for RPL3P1 Gene

Evolution for RPL3P1 Gene

ENSEMBL:
Gene Tree for RPL3P1 (if available)
TreeFam:
Gene Tree for RPL3P1 (if available)

No data available for Orthologs for RPL3P1 Gene

Paralogs for RPL3P1 Gene

No data available for Paralogs for RPL3P1 Gene

Variants for RPL3P1 Gene

Relevant External Links for RPL3P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL3P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL3P1 Gene

Disorders for RPL3P1 Gene

No disorders were found for RPL3P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL3P1 Gene

Publications for RPL3P1 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Mapping of a novel human carbonyl reductase, CBR3, and ribosomal pseudogenes to human chromosome 21q22.2. (PMID: 9740676) Watanabe K. … Nomura T. (Genomics 1998) 2 3 64
  3. The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M. … Yaspo M.-L. (Nature 2000) 3 64

Products for RPL3P1 Gene

Sources for RPL3P1 Gene

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