Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL39P36 Gene

Aliases for RPL39P36 Gene

  • Ribosomal Protein L39 Pseudogene 36 2 3 5
  • RPL39_17_1668 3

External Ids for RPL39P36 Gene

Previous GeneCards Identifiers for RPL39P36 Gene

  • GC19U901031
  • GC19P053917

Summaries for RPL39P36 Gene

GeneCards Summary for RPL39P36 Gene

RPL39P36 (Ribosomal Protein L39 Pseudogene 36) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL39P36 Gene

Genomics for RPL39P36 Gene

Regulatory Elements for RPL39P36 Gene

Enhancers for RPL39P36 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19G053393 1 ENCODE 0.4 -18.0 -18028 2.3 ATF1 FOXA2 PKNOX1 ARID4B SIN3A GLIS2 ELK1 ZNF143 ZNF263 SP3 ZNF525 TPM3P6 ZNF765 RPL39P36
GH19G053389 1 Ensembl ENCODE 0.3 -23.2 -23212 1.8 KLF1 CREB3L1 SUZ12 ZSCAN4 ZNF76 DEAF1 FOSL1 ZNF766 DIDO1 ZNF366 ZNF525 ZNF808 ENSG00000268970 ZNF845 ZNF137P ZNF765 ZNF816 ENSG00000269825 ENSG00000269001 ZNF813
GH19G053420 0.7 ENCODE 0.4 +7.9 7860 0.9 SOX13 DRAP1 FOXA2 ZNF792 SAP130 ZMYM3 ARID4B TEAD3 THAP11 GATAD2A ZNF761 VN1R101P RPL39P36
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL39P36 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL39P36 Gene

Chromosome:
19
Start:
53,413,140 bp from pter
End:
53,413,539 bp from pter
Size:
400 bases
Orientation:
Plus strand

Genomic View for RPL39P36 Gene

Genes around RPL39P36 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL39P36 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL39P36 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL39P36 Gene

Proteins for RPL39P36 Gene

Post-translational modifications for RPL39P36 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL39P36 Gene

Domains & Families for RPL39P36 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL39P36 Gene

Function for RPL39P36 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL39P36 Gene

Localization for RPL39P36 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL39P36 Gene

Pathways & Interactions for RPL39P36 Gene

SuperPathways for RPL39P36 Gene

No Data Available

Interacting Proteins for RPL39P36 Gene

Gene Ontology (GO) - Biological Process for RPL39P36 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL39P36 Gene

Drugs & Compounds for RPL39P36 Gene

No Compound Related Data Available

Transcripts for RPL39P36 Gene

mRNA/cDNA for RPL39P36 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL39P36 Gene

No ASD Table

Relevant External Links for RPL39P36 Gene

GeneLoc Exon Structure for
RPL39P36
ECgene alternative splicing isoforms for
RPL39P36

Expression for RPL39P36 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL39P36 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL39P36 Gene:

RPL39P36
genes like me logo Genes that share expression patterns with RPL39P36: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL39P36 Gene

Orthologs for RPL39P36 Gene

Evolution for RPL39P36 Gene

ENSEMBL:
Gene Tree for RPL39P36 (if available)
TreeFam:
Gene Tree for RPL39P36 (if available)

No data available for Orthologs for RPL39P36 Gene

Paralogs for RPL39P36 Gene

No data available for Paralogs for RPL39P36 Gene

Variants for RPL39P36 Gene

Relevant External Links for RPL39P36 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL39P36

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL39P36 Gene

Disorders for RPL39P36 Gene

No disorders were found for RPL39P36 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL39P36 Gene

Publications for RPL39P36 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL39P36 Gene

Sources for RPL39P36 Gene

Content
Loading form....