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Aliases for RPL39P24 Gene

Aliases for RPL39P24 Gene

  • Ribosomal Protein L39 Pseudogene 24 2 3
  • RPL39_11_1016 3
  • RP11-415H23.4 5

External Ids for RPL39P24 Gene

Previous GeneCards Identifiers for RPL39P24 Gene

  • GC09U901263
  • GC09P135838

Summaries for RPL39P24 Gene

GeneCards Summary for RPL39P24 Gene

RPL39P24 (Ribosomal Protein L39 Pseudogene 24) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL39P24 Gene

Genomics for RPL39P24 Gene

Regulatory Elements for RPL39P24 Gene

Enhancers for RPL39P24 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F132937 0.2 Ensembl 12.2 -24.7 -24653 0.4 BCOR SMARCE1 NR2F1 ZMYM3 DPF2 ARID1B ATF3 SMARCA4 FOS TRIM24 RPL39P24 RNU7-21P AK8 SPACA9 GFI1B PIR193201
GH09F133022 0.8 Ensembl ENCODE 11.7 +60.4 60441 1.4 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 CBX5 SETX RNU7-21P RPL39P24 GTF3C4 TSC1 EEF1A1P5 GC09P133063 GC09P133071 GC09P133075 GC09P133077
GH09F132994 0.8 Ensembl ENCODE 11.6 +32.3 32348 1.2 HDGF HDAC1 ATF1 CBX3 TBL1XR1 GATA2 SCRT2 FOS CREM ZBTB2 RNU7-21P RPL39P24 GTF3C4 TSC1 SETX GTF3C5 OBP2B GC09P133045 GC09P133069 GC09P133080
GH09F133008 0.2 ENCODE 11.6 +46.6 46576 0.1 HDAC1 PKNOX1 FOXA3 HLF CEBPB ARID1B NFIL3 SMARCA4 PBX2 IKZF1 RNU7-21P RPL39P24 GTF3C5 CEL GC09P133045 GC09P133069 GC09P133080 GC09P133081 GC09P132965
GH09F132908 0.2 ENCODE 11.3 -53.6 -53635 0.1 ZNF362 AK8 SPACA9 TSC1 GFI1B RNU7-21P RPL39P24 PIR193201 PIR60978
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL39P24 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL39P24 Gene

Chromosome:
9
Start:
132,962,453 bp from pter
End:
132,962,771 bp from pter
Size:
319 bases
Orientation:
Plus strand

Genomic View for RPL39P24 Gene

Genes around RPL39P24 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL39P24 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL39P24 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL39P24 Gene

Proteins for RPL39P24 Gene

Post-translational modifications for RPL39P24 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL39P24 Gene

Domains & Families for RPL39P24 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL39P24 Gene

Function for RPL39P24 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL39P24 Gene

Localization for RPL39P24 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL39P24 Gene

Pathways & Interactions for RPL39P24 Gene

SuperPathways for RPL39P24 Gene

No Data Available

Interacting Proteins for RPL39P24 Gene

Gene Ontology (GO) - Biological Process for RPL39P24 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL39P24 Gene

Transcripts for RPL39P24 Gene

mRNA/cDNA for RPL39P24 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL39P24 Gene

No ASD Table

Relevant External Links for RPL39P24 Gene

GeneLoc Exon Structure for
RPL39P24
ECgene alternative splicing isoforms for
RPL39P24

Expression for RPL39P24 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL39P24 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL39P24 Gene:

RPL39P24
genes like me logo Genes that share expression patterns with RPL39P24: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL39P24 Gene

Orthologs for RPL39P24 Gene

Evolution for RPL39P24 Gene

ENSEMBL:
Gene Tree for RPL39P24 (if available)
TreeFam:
Gene Tree for RPL39P24 (if available)

No data available for Orthologs for RPL39P24 Gene

Paralogs for RPL39P24 Gene

No data available for Paralogs for RPL39P24 Gene

Variants for RPL39P24 Gene

Relevant External Links for RPL39P24 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL39P24

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL39P24 Gene

Disorders for RPL39P24 Gene

No disorders were found for RPL39P24 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL39P24 Gene

Publications for RPL39P24 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL39P24 Gene

Sources for RPL39P24 Gene

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