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Aliases for RPL39P22 Gene

Aliases for RPL39P22 Gene

  • Ribosomal Protein L39 Pseudogene 22 2 3
  • CTD-2282P23.1 5
  • RPL39_8_554 3

External Ids for RPL39P22 Gene

Previous GeneCards Identifiers for RPL39P22 Gene

  • GC05U901073
  • GC05P036589
  • GC05P036590
  • GC05P036591
  • GC05P036592
  • GC05P036593
  • GC05P036594
  • GC05P036595
  • GC05P036596
  • GC05P036597
  • GC05P036598
  • GC05P036599
  • GC05P036600
  • GC05P036601

Summaries for RPL39P22 Gene

GeneCards Summary for RPL39P22 Gene

RPL39P22 (Ribosomal Protein L39 Pseudogene 22) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL39P22 Gene

Genomics for RPL39P22 Gene

Regulatory Elements for RPL39P22 Gene

Enhancers for RPL39P22 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F036593 0.2 Ensembl 0.4 +5.3 5295 0.4 RPL39P22 SLC1A3
GH05F036595 0.8 ENCODE 0.4 +8.0 7972 1.3 SLC1A3 RPL39P22
GH05F036573 1.1 Ensembl ENCODE 0.4 -13.8 -13770 3.3 SCRT1 JUN USF2 ZNF335 JUND ZNF316 MAFF SCRT2 FOS MAFK SLC1A3 RPL39P22 RNA5SP181
GH05F036561 0.4 Ensembl 0.3 -26.6 -26606 0.2 MYC SLC1A3 RPL39P22 RNA5SP181
GH05F036502 0.9 ENCODE 0.2 -85.7 -85725 1.1 INSM2 SIN3A FEZF1 RAD21 BRCA1 GLIS2 ZNF366 RCOR1 ZNF391 ZNF362 SLC1A3 KRT18P31 RNA5SP181 RPL39P22
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL39P22 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL39P22 Gene

Chromosome:
5
Start:
36,588,506 bp from pter
End:
36,588,661 bp from pter
Size:
156 bases
Orientation:
Plus strand

Genomic View for RPL39P22 Gene

Genes around RPL39P22 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL39P22 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL39P22 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL39P22 Gene

Proteins for RPL39P22 Gene

Post-translational modifications for RPL39P22 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL39P22 Gene

Domains & Families for RPL39P22 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL39P22 Gene

Function for RPL39P22 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL39P22 Gene

Localization for RPL39P22 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL39P22 Gene

Pathways & Interactions for RPL39P22 Gene

SuperPathways for RPL39P22 Gene

No Data Available

Interacting Proteins for RPL39P22 Gene

Gene Ontology (GO) - Biological Process for RPL39P22 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL39P22 Gene

Transcripts for RPL39P22 Gene

mRNA/cDNA for RPL39P22 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL39P22 Gene

No ASD Table

Relevant External Links for RPL39P22 Gene

GeneLoc Exon Structure for
RPL39P22
ECgene alternative splicing isoforms for
RPL39P22

Expression for RPL39P22 Gene

mRNA expression in normal human tissues for RPL39P22 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL39P22 Gene:

RPL39P22
genes like me logo Genes that share expression patterns with RPL39P22: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL39P22 Gene

Orthologs for RPL39P22 Gene

Evolution for RPL39P22 Gene

ENSEMBL:
Gene Tree for RPL39P22 (if available)
TreeFam:
Gene Tree for RPL39P22 (if available)

No data available for Orthologs for RPL39P22 Gene

Paralogs for RPL39P22 Gene

No data available for Paralogs for RPL39P22 Gene

Variants for RPL39P22 Gene

Relevant External Links for RPL39P22 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL39P22

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL39P22 Gene

Disorders for RPL39P22 Gene

No disorders were found for RPL39P22 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL39P22 Gene

Publications for RPL39P22 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL39P22 Gene

Sources for RPL39P22 Gene

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