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Aliases for RPL39P19 Gene

Aliases for RPL39P19 Gene

  • Ribosomal Protein L39 Pseudogene 19 2 3
  • RPL39_8_448 3

External Ids for RPL39P19 Gene

Previous GeneCards Identifiers for RPL39P19 Gene

  • GC03U901255
  • GC03M186838

Summaries for RPL39P19 Gene

GeneCards Summary for RPL39P19 Gene

RPL39P19 (Ribosomal Protein L39 Pseudogene 19) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL39P19 Gene

Genomics for RPL39P19 Gene

Regulatory Elements for RPL39P19 Gene

Enhancers for RPL39P19 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F187129 1.1 FANTOM5 Ensembl ENCODE 0.4 -9.2 -9232 2.4 CTCF IRF2 PKNOX1 JUN RAD21 CBX5 ZNF26 ZNF143 FOS TRIM24 SNORA81 ENSG00000200418 SNORA63 SNORA4 TBCCD1 RPL39L EIF4A2 ADIPOQ RFC4 MIR1248
GH03F187113 1.2 ENCODE 0.4 +8.0 7962 0.2 CTCF KLF16 SMC3 TRIM22 REST RAD21 RPL39L RPL39P19 PIR46786
GH03F187101 1.4 FANTOM5 Ensembl ENCODE 0.3 +19.4 19367 1.7 IRF2 PKNOX1 SIN3A ZBTB40 ZNF366 GATA2 SCRT2 RCOR1 ZNF362 STAT1 ADIPOQ RPL39P19 PIR46786
GH03F187104 0.7 ENCODE 0.3 +16.4 16381 1.0 SCRT1 TFAP4 SMAD5 FOXA3 FOXA1 HIC1 SCRT2 GLIS1 ADIPOQ LOC100131635 RPL39P19 PIR46786
GH03F187138 0.8 ENCODE 0.3 -18.0 -18042 1.9 ATF1 PKNOX1 CREB3L1 SIN3A BRCA1 ZNF2 GLIS2 CBX5 ZNF143 SP3 ADIPOQ RPL39P19 RPL39L
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL39P19 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL39P19 Gene

Chromosome:
3
Start:
187,120,954 bp from pter
End:
187,121,349 bp from pter
Size:
396 bases
Orientation:
Minus strand

Genomic View for RPL39P19 Gene

Genes around RPL39P19 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL39P19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL39P19 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL39P19 Gene

Proteins for RPL39P19 Gene

Post-translational modifications for RPL39P19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL39P19 Gene

Domains & Families for RPL39P19 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL39P19 Gene

Function for RPL39P19 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL39P19 Gene

Localization for RPL39P19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL39P19 Gene

Pathways & Interactions for RPL39P19 Gene

SuperPathways for RPL39P19 Gene

No Data Available

Interacting Proteins for RPL39P19 Gene

Gene Ontology (GO) - Biological Process for RPL39P19 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL39P19 Gene

Transcripts for RPL39P19 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPL39P19 Gene

No ASD Table

Relevant External Links for RPL39P19 Gene

GeneLoc Exon Structure for
RPL39P19
ECgene alternative splicing isoforms for
RPL39P19

No data available for mRNA/cDNA for RPL39P19 Gene

Expression for RPL39P19 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL39P19 Gene:

RPL39P19
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL39P19 Gene

Orthologs for RPL39P19 Gene

No data available for Orthologs and Evolution for RPL39P19 Gene

Paralogs for RPL39P19 Gene

No data available for Paralogs for RPL39P19 Gene

Variants for RPL39P19 Gene

Relevant External Links for RPL39P19 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL39P19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL39P19 Gene

Disorders for RPL39P19 Gene

No disorders were found for RPL39P19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL39P19 Gene

Publications for RPL39P19 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL39P19 Gene

Sources for RPL39P19 Gene

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