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Aliases for RPL39P17 Gene

Aliases for RPL39P17 Gene

  • Ribosomal Protein L39 Pseudogene 17 2 3
  • RP11-715I4.1 5
  • RPL39_6_343 3

External Ids for RPL39P17 Gene

Previous GeneCards Identifiers for RPL39P17 Gene

  • GC03U901242
  • GC03M013095
  • GC03M013184
  • GC03M013299
  • GC03M013407
  • GC03M013547
  • GC03M013182
  • GC03M013632
  • GC03M013755
  • GC03M013879
  • GC03M013993

Summaries for RPL39P17 Gene

GeneCards Summary for RPL39P17 Gene

RPL39P17 (Ribosomal Protein L39 Pseudogene 17) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL39P17 Gene

Genomics for RPL39P17 Gene

Regulatory Elements for RPL39P17 Gene

Enhancers for RPL39P17 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G013044 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +6.9 6891 3.8 HDGF PKNOX1 SIN3A ZNF143 JUNB ZNF623 TBX21 SMARCA4 PBX2 NBN IQSEC1 RPL32 RPL39P17 GC03P013023
GH03G013050 0.9 dbSUPER 0.7 -0.6 -624 6.0 ELF3 ATF1 CBX3 PKNOX1 RB1 ARID4B SIN3A ZNF48 ZNF2 RAD21 RPL39P17 GC03P013057
GH03G013049 0.7 dbSUPER 0.7 +3.1 3113 1.1 CTCF ESRRA MXI1 SAP130 ZMYM3 ARID4B SIN3A ZNF48 RAD21 ZNF366 RPL39P17 GC03P013023
GH03G013039 1.1 ENCODE dbSUPER 0.4 +12.7 12731 1.1 HDAC1 HDGF TCF12 ZNF121 GATA2 ZNF207 RELB IKZF2 CBFB USF2 RPL39P17 GC03P013023
GH03G013024 1.3 Ensembl ENCODE dbSUPER 0.3 +27.9 27889 1.3 HDGF PKNOX1 ESRRA KLF17 ZFHX2 CTBP1 ZNF366 POLR2A ZBTB48 ZNF207 IQSEC1 GC03P013023 RPL39P17
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL39P17 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL39P17 Gene

13,052,774 bp from pter
13,053,182 bp from pter
409 bases
Minus strand

Genomic View for RPL39P17 Gene

Genes around RPL39P17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL39P17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL39P17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL39P17 Gene

Proteins for RPL39P17 Gene

Post-translational modifications for RPL39P17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL39P17 Gene

Domains & Families for RPL39P17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL39P17 Gene

Function for RPL39P17 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL39P17 Gene

Localization for RPL39P17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL39P17 Gene

Pathways & Interactions for RPL39P17 Gene

SuperPathways for RPL39P17 Gene

No Data Available

Interacting Proteins for RPL39P17 Gene

Gene Ontology (GO) - Biological Process for RPL39P17 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL39P17 Gene

Drugs & Compounds for RPL39P17 Gene

No Compound Related Data Available

Transcripts for RPL39P17 Gene

mRNA/cDNA for RPL39P17 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL39P17 Gene

No ASD Table

Relevant External Links for RPL39P17 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL39P17 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL39P17 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL39P17 Gene:

genes like me logo Genes that share expression patterns with RPL39P17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL39P17 Gene

Orthologs for RPL39P17 Gene

Evolution for RPL39P17 Gene

Gene Tree for RPL39P17 (if available)
Gene Tree for RPL39P17 (if available)

No data available for Orthologs for RPL39P17 Gene

Paralogs for RPL39P17 Gene

No data available for Paralogs for RPL39P17 Gene

Variants for RPL39P17 Gene

Relevant External Links for RPL39P17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL39P17 Gene

Disorders for RPL39P17 Gene

Relevant External Links for RPL39P17

Genetic Association Database (GAD)

No disorders were found for RPL39P17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL39P17 Gene

Publications for RPL39P17 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL39P17 Gene

Sources for RPL39P17 Gene

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