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Aliases for RPL39P14 Gene

Aliases for RPL39P14 Gene

  • Ribosomal Protein L39 Pseudogene 14 2 3
  • RPL39_6_311 3
  • AC079354.2 5

External Ids for RPL39P14 Gene

Previous GeneCards Identifiers for RPL39P14 Gene

  • GC02P202805
  • GC02P203097

Summaries for RPL39P14 Gene

GeneCards Summary for RPL39P14 Gene

RPL39P14 (Ribosomal Protein L39 Pseudogene 14) is a Pseudogene.

Additional gene information for RPL39P14 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL39P14 Gene

Genomics for RPL39P14 Gene

GeneHancer (GH) Regulatory Elements for RPL39P14 Gene

Promoters and enhancers for RPL39P14 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I202236 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 6.9 +6.5 6538 2.9 HDGF PKNOX1 SMAD1 MLX ARID4B SIN3A ZNF2 SLC30A9 POLR2B E2F8 GC02P202236 LOC100287425 SUMO1 LOC100420110 FAM117B NOP58 ENSG00000273456 RPL39P14
GH02I202133 Enhancer 0.8 Ensembl ENCODE 4.6 -96.3 -96341 3.2 CEBPB NR2F2 SP1 JUND POLR2A FOS FOSL2 ZBTB33 RNU6-440P CDK15 ENSG00000273456 BMPR2 ICA1L RPL39P14 NBEAL1 LOC729224 PSMA2P3 KIAA2012
GH02I202123 Enhancer 0.2 Ensembl 5.8 -108.5 -108547 0.2 RNU6-440P RPL39P14 LOC729224 KIAA2012 PSMA2P3
GH02I202225 Enhancer 0.3 FANTOM5 0.4 -6.1 -6069 0.1 NOP58 ENSG00000212309 SNORD70 LOC729224 RPL39P14 SUMO1 DAZAP2P1
GH02I202215 Enhancer 0.2 ENCODE 0.4 -16.3 -16255 0.2 DAZAP2P1 RPL39P14 SUMO1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL39P14 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL39P14 Gene

Genomic Locations for RPL39P14 Gene
chr2:202,231,648-202,232,040
(GRCh38/hg38)
Size:
393 bases
Orientation:
Plus strand
chr2:203,096,371-203,096,763
(GRCh37/hg19)

Genomic View for RPL39P14 Gene

Genes around RPL39P14 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL39P14 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL39P14 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL39P14 Gene

Proteins for RPL39P14 Gene

Post-translational modifications for RPL39P14 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL39P14 Gene

Domains & Families for RPL39P14 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL39P14 Gene

Function for RPL39P14 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL39P14 Gene

Localization for RPL39P14 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL39P14 Gene

Pathways & Interactions for RPL39P14 Gene

SuperPathways for RPL39P14 Gene

No Data Available

Interacting Proteins for RPL39P14 Gene

Gene Ontology (GO) - Biological Process for RPL39P14 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL39P14 Gene

Drugs & Compounds for RPL39P14 Gene

No Compound Related Data Available

Transcripts for RPL39P14 Gene

mRNA/cDNA for RPL39P14 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL39P14 Gene

No ASD Table

Relevant External Links for RPL39P14 Gene

GeneLoc Exon Structure for
RPL39P14
ECgene alternative splicing isoforms for
RPL39P14

Expression for RPL39P14 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL39P14 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL39P14 Gene:

RPL39P14
genes like me logo Genes that share expression patterns with RPL39P14: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL39P14 Gene

Orthologs for RPL39P14 Gene

Evolution for RPL39P14 Gene

ENSEMBL:
Gene Tree for RPL39P14 (if available)
TreeFam:
Gene Tree for RPL39P14 (if available)

No data available for Orthologs for RPL39P14 Gene

Paralogs for RPL39P14 Gene

No data available for Paralogs for RPL39P14 Gene

Variants for RPL39P14 Gene

Variation tolerance for RPL39P14 Gene

Gene Damage Index Score: 0.27; 6.08% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for RPL39P14 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL39P14

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for RPL39P14 Gene

Disorders for RPL39P14 Gene

No disorders were found for RPL39P14 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL39P14 Gene

Publications for RPL39P14 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL39P14 Gene

Sources for RPL39P14 Gene

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