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Aliases for RPL39P13 Gene

Aliases for RPL39P13 Gene

  • Ribosomal Protein L39 Pseudogene 13 2 3
  • RPL39_3_72 3
  • AL714022.1 5

External Ids for RPL39P13 Gene

Previous GeneCards Identifiers for RPL39P13 Gene

  • GC01P091840
  • GC01P092066

Summaries for RPL39P13 Gene

GeneCards Summary for RPL39P13 Gene

RPL39P13 (Ribosomal Protein L39 Pseudogene 13) is a Pseudogene.

Additional gene information for RPL39P13 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL39P13 Gene

Genomics for RPL39P13 Gene

GeneHancer (GH) Regulatory Elements for RPL39P13 Gene

Promoters and enhancers for RPL39P13 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I091581 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -17.0 -16972 2.7 KLF1 USF1 ZIC2 E4F1 CTBP1 CBFA2T2 FOS ZNF10 USF2 ZEB2 CDC7 LOC102723436 RPL39P13
GH01I091568 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -29.3 -29320 3.6 HDAC1 HDGF PKNOX1 BMI1 IRF4 ZNF366 EGR1 IKZF2 RUNX3 EGR2 LOC102723436 RPL39P13
GH01I091590 Enhancer 1 Ensembl ENCODE 0.4 -8.7 -8710 1.2 HDAC1 ATF1 RB1 ARNT ZBTB40 ARID2 EGR1 ATF7 CEBPB NCOA1 RPL39P13 LOC102723436
GH01I091575 Enhancer 0.5 ENCODE 0.3 -25.0 -24973 0.2 PKNOX1 IKZF1 ZSCAN5C ZSCAN4 CBFA2T3 ZBTB17 LOC102723436 RPL39P13
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL39P13 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL39P13 Gene

Genomic Locations for RPL39P13 Gene
393 bases
Plus strand

Genomic View for RPL39P13 Gene

Genes around RPL39P13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL39P13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL39P13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL39P13 Gene

Proteins for RPL39P13 Gene

Post-translational modifications for RPL39P13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL39P13 Gene

Domains & Families for RPL39P13 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL39P13 Gene

Function for RPL39P13 Gene

Phenotypes From GWAS Catalog for RPL39P13 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL39P13 Gene

Localization for RPL39P13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL39P13 Gene

Pathways & Interactions for RPL39P13 Gene

SuperPathways for RPL39P13 Gene

No Data Available

Interacting Proteins for RPL39P13 Gene

Gene Ontology (GO) - Biological Process for RPL39P13 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL39P13 Gene

Drugs & Compounds for RPL39P13 Gene

No Compound Related Data Available

Transcripts for RPL39P13 Gene

mRNA/cDNA for RPL39P13 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL39P13 Gene

No ASD Table

Relevant External Links for RPL39P13 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL39P13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL39P13 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL39P13 Gene:

genes like me logo Genes that share expression patterns with RPL39P13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL39P13 Gene

Orthologs for RPL39P13 Gene

Evolution for RPL39P13 Gene

Gene Tree for RPL39P13 (if available)
Gene Tree for RPL39P13 (if available)

No data available for Orthologs for RPL39P13 Gene

Paralogs for RPL39P13 Gene

No data available for Paralogs for RPL39P13 Gene

Variants for RPL39P13 Gene

Additional Variant Information for RPL39P13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL39P13 Gene

Disorders for RPL39P13 Gene

Additional Disease Information for RPL39P13

Genetic Association Database

No disorders were found for RPL39P13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL39P13 Gene

Publications for RPL39P13 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Genome-wide association studies in Asians confirm the involvement of ATOH7 and TGFBR3, and further identify CARD10 as a novel locus influencing optic disc area. (PMID: 21307088) Khor CC … Aung T (Human molecular genetics 2011) 44 58
  3. Genome-wide association identifies ATOH7 as a major gene determining human optic disc size. (PMID: 20395239) Macgregor S … Mackey DA (Human molecular genetics 2010) 44 58
  4. A genome-wide association study of optic disc parameters. (PMID: 20548946) Ramdas WD … van Duijn CM (PLoS genetics 2010) 44 58

Products for RPL39P13 Gene

Sources for RPL39P13 Gene

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