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Aliases for RPL37A Gene

Aliases for RPL37A Gene

  • Ribosomal Protein L37a 2 3 5
  • 60S Ribosomal Protein L37a 3
  • L37A 3

External Ids for RPL37A Gene

Previous GeneCards Identifiers for RPL37A Gene

  • GC02P215460
  • GC02P216084
  • GC02P217327
  • GC02P217566
  • GC02P217189
  • GC02P217071
  • GC02P209217

Summaries for RPL37A Gene

Entrez Gene Summary for RPL37A Gene

  • Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L37AE family of ribosomal proteins. It is located in the cytoplasm. The protein contains a C4-type zinc finger-like domain. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]

GeneCards Summary for RPL37A Gene

RPL37A (Ribosomal Protein L37a) is a Protein Coding gene. Among its related pathways are Metabolism and Viral mRNA Translation. GO annotations related to this gene include poly(A) RNA binding and structural constituent of ribosome.

Gene Wiki entry for RPL37A Gene

No data available for UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL37A Gene

Genomics for RPL37A Gene

Regulatory Elements for RPL37A Gene

Enhancers for RPL37A Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F215653 1.3 FANTOM5 ENCODE 9.9 -844.0 -844026 1.3 ELF3 ZFP64 ARID4B ZSCAN9 RAD21 SLC30A9 ZNF138 THAP11 MIXL1 ZNF202 SMARCAL1 RPL37A GC02M215662 ENSG00000227981
GH02F216497 1.1 ENCODE 11.2 +1.2 1203 3.8 CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A DMAP1 YBX1 ZNF2 YY1 SMARCAL1 IGFBP5 RPL37A GC02M216502 LOC100507554
GH02F216107 1.1 ENCODE 10.5 -386.6 -386578 8.6 HDGF PKNOX1 MLX WRNIP1 ZFP64 ARID4B SIN3A DMAP1 YY1 SLC30A9 LINC01963 IGFBP5 RPL37A XRCC5 PIR31186
GH02F216475 0.6 Ensembl 11.8 -22.7 -22689 1.0 MTA2 IKZF1 EED ETV6 SPI1 ENSG00000232485 RPL37A GC02M216466 ENSG00000241520
GH02F216495 0.8 Ensembl 0.8 -2.4 -2389 1.6 PKNOX1 JUN MAX KLF17 FEZF1 CEBPG RAD21 FOSL1 HIC1 ZNF366 SMARCAL1 RPL37A ENSG00000241520
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL37A on UCSC Golden Path with GeneCards custom track

Promoters for RPL37A Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000125220 911 2601 CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A DMAP1 YBX1 ZNF2 YY1

Genomic Location for RPL37A Gene

Chromosome:
2
Start:
216,498,189 bp from pter
End:
216,579,180 bp from pter
Size:
80,992 bases
Orientation:
Plus strand

Genomic View for RPL37A Gene

Genes around RPL37A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL37A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL37A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL37A Gene

Proteins for RPL37A Gene

  • Protein details for RPL37A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P61513-RL37A_HUMAN
    Recommended name:
    60S ribosomal protein L37a
    Protein Accession:
    P61513
    Secondary Accessions:
    • P12751
    • Q6FGF5

    Protein attributes for RPL37A Gene

    Size:
    92 amino acids
    Molecular mass:
    10275 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for RPL37A Gene

neXtProt entry for RPL37A Gene

Post-translational modifications for RPL37A Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for RPL37A Gene

Domains & Families for RPL37A Gene

Gene Families for RPL37A Gene

Protein Domains for RPL37A Gene

Suggested Antigen Peptide Sequences for RPL37A Gene

Graphical View of Domain Structure for InterPro Entry

P61513

UniProtKB/Swiss-Prot:

RL37A_HUMAN :
  • Belongs to the ribosomal protein L37Ae family.
Family:
  • Belongs to the ribosomal protein L37Ae family.
genes like me logo Genes that share domains with RPL37A: view

Function for RPL37A Gene

Gene Ontology (GO) - Molecular Function for RPL37A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003735 structural constituent of ribosome IEA,NAS 12962325
GO:0005515 protein binding IPI 25416956
GO:0044822 poly(A) RNA binding IDA 22681889
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with RPL37A: view
genes like me logo Genes that share phenotypes with RPL37A: view

Animal Model Products

Inhibitory RNA Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RPL37A Gene

Localization for RPL37A Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for RPL37A gene
Compartment Confidence
extracellular 5
nucleus 5
cytosol 5
endoplasmic reticulum 2

Gene Ontology (GO) - Cellular Components for RPL37A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular IEA --
GO:0005634 nucleus IDA 21630459
GO:0005829 cytosol TAS --
GO:0005840 ribosome IEA --
GO:0005925 focal adhesion IDA 21423176
genes like me logo Genes that share ontologies with RPL37A: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for RPL37A Gene

Pathways & Interactions for RPL37A Gene

genes like me logo Genes that share pathways with RPL37A: view

Pathways by source for RPL37A Gene

1 KEGG pathway for RPL37A Gene
1 GeneGo (Thomson Reuters) pathway for RPL37A Gene

Gene Ontology (GO) - Biological Process for RPL37A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS --
GO:0006364 rRNA processing TAS --
GO:0006412 translation IEA,NAS 12962325
GO:0006413 translational initiation TAS --
GO:0006614 SRP-dependent cotranslational protein targeting to membrane TAS --
genes like me logo Genes that share ontologies with RPL37A: view

No data available for SIGNOR curated interactions for RPL37A Gene

Transcripts for RPL37A Gene

Unigene Clusters for RPL37A Gene

Ribosomal protein L37a:
Representative Sequences:

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL37A Gene

ExUns: 1a · 1b · 1c ^ 2a · 2b ^ 3 ^ 4a · 4b · 4c ^ 5a · 5b
SP1: - - - -
SP2: - -
SP3: - - -
SP4: - -
SP5: -

Relevant External Links for RPL37A Gene

GeneLoc Exon Structure for
RPL37A
ECgene alternative splicing isoforms for
RPL37A

Expression for RPL37A Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL37A Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for RPL37A Gene

This gene is overexpressed in Tlymphocyte (7.8) and Lung (6.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for RPL37A Gene



Protein tissue co-expression partners for RPL37A Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of RPL37A Gene:

RPL37A

SOURCE GeneReport for Unigene cluster for RPL37A Gene:

Hs.433701
genes like me logo Genes that share expression patterns with RPL37A: view

Primer Products

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for RPL37A Gene

Orthologs for RPL37A Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for RPL37A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia RPL37A 34 35
  • 100 (n)
oppossum
(Monodelphis domestica)
Mammalia RPL37A 35
  • 100 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia RPL37A 35
  • 99 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Rpl37a 34 16 35
  • 90.58 (n)
dog
(Canis familiaris)
Mammalia -- 35
  • 90 (a)
OneToMany
RPL37A 34
  • 89.13 (n)
-- 35
  • 79 (a)
OneToMany
-- 35
  • 57 (a)
OneToMany
cow
(Bos Taurus)
Mammalia RPL37A 34 35
  • 89.49 (n)
rat
(Rattus norvegicus)
Mammalia Rpl37a 34
  • 84.78 (n)
chicken
(Gallus gallus)
Aves RPL37A 34 35
  • 83.7 (n)
lizard
(Anolis carolinensis)
Reptilia -- 35
  • 98 (a)
OneToMany
-- 35
  • 81 (a)
OneToMany
tropical clawed frog
(Silurana tropicalis)
Amphibia rpl37a 34
  • 84.42 (n)
Str.1005 34
African clawed frog
(Xenopus laevis)
Amphibia MGC64282 34
zebrafish
(Danio rerio)
Actinopterygii RPL37A 35
  • 97 (a)
OneToOne
zgc:171772 34
  • 81.88 (n)
fruit fly
(Drosophila melanogaster)
Insecta RpL37a 36
  • 76 (a)
RpL37A 34 35
  • 71.38 (n)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP009920 34
  • 69.66 (n)
worm
(Caenorhabditis elegans)
Secernentea rpl-43 34 35
  • 67.03 (n)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes RPL43B 35
  • 66 (a)
OneToMany
RPL43A 34 35
  • 64.47 (n)
A. gosspyii yeast
(Ashbya gossypii)
Saccharomycetes AGOS_AGL310C 34
  • 65.57 (n)
K. lactis yeast
(Kluyveromyces lactis)
Saccharomycetes KLLA0E05941g 34
  • 62.64 (n)
thale cress
(Arabidopsis thaliana)
eudicotyledons AT3G10950 34
  • 59.85 (n)
Alicante grape
(Vitis vinifera)
eudicotyledons Vvi.2253 34
rice
(Oryza sativa)
Liliopsida Os05g0557000 34
  • 62.5 (n)
bread mold
(Neurospora crassa)
Ascomycetes NCU07562 34
  • 62.64 (n)
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes rpl4302 34
  • 56.41 (n)
Species where no ortholog for RPL37A was found in the sources mined by GeneCards:
  • Actinobacteria (Mycobacterium tuberculosis)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for RPL37A Gene

ENSEMBL:
Gene Tree for RPL37A (if available)
TreeFam:
Gene Tree for RPL37A (if available)

Paralogs for RPL37A Gene

(1) SIMAP similar genes for RPL37A Gene using alignment to 7 proteins:

genes like me logo Genes that share paralogs with RPL37A: view

No data available for Paralogs for RPL37A Gene

Variants for RPL37A Gene

Sequence variations from dbSNP and Humsavar for RPL37A Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1065702 -- 216,501,388(+) GAAGG(A/G)GTTGA reference, missense
rs11098 -- 216,499,323(+) TATGG(A/G)GCCTC upstream-variant-2KB, reference, synonymous-codon
rs111309414 -- 216,499,928(+) TAGTG(A/C)AAATT intron-variant, upstream-variant-2KB
rs111366788 -- 216,497,345(+) ATCAT(A/G)AAGGA intron-variant, upstream-variant-2KB
rs111803418 -- 216,499,399(+) GCAAA(A/G)TAAGT upstream-variant-2KB, splice-donor-variant

Structural Variations from Database of Genomic Variants (DGV) for RPL37A Gene

Variant ID Type Subtype PubMed ID
nsv1006201 CNV gain 25217958

Variation tolerance for RPL37A Gene

Residual Variation Intolerance Score: 51.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.15; 3.42% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for RPL37A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL37A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RPL37A Gene

Disorders for RPL37A Gene

Relevant External Links for RPL37A

Genetic Association Database (GAD)
RPL37A
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RPL37A

No disorders were found for RPL37A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL37A Gene

Publications for RPL37A Gene

  1. Primary sequence of the human ribosomal protein L37a. (PMID: 1437567) Hoof T. … Tuemmler B. (Nucleic Acids Res. 1992) 2 3 4 22 64
  2. Human ribosomal protein L37a: cloning of the cDNA and analysis of differential gene expression in tissues and cell lines. (PMID: 8224875) Saha D.P. … Howells R.D. (Gene 1993) 3 4 22 64
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  5. Quantitative Proteomics Reveals Dynamic Interactions of the Minichromosome Maintenance Complex (MCM) in the Cellular Response to Etoposide Induced DNA Damage. (PMID: 25963833) Drissi R. … Boisvert F.M. (Mol. Cell Proteomics 2015) 3 64

Products for RPL37A Gene

Sources for RPL37A Gene

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