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Aliases for RPL36P17 Gene

Subcategory (RNA class) for RPL36P17 Gene

antisense

Aliases for RPL36P17 Gene

  • Ribosomal Protein L36 Pseudogene 17 2 3
  • RPL36_8_1743 3
  • CTA-85E5.7 5

External Ids for RPL36P17 Gene

ORGUL Members for RPL36P17 Gene

Previous GeneCards Identifiers for RPL36P17 Gene

  • GC22U900523
  • GC22M030502

Summaries for RPL36P17 Gene

GeneCards Summary for RPL36P17 Gene

RPL36P17 (Ribosomal Protein L36 Pseudogene 17) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36P17 Gene

Genomics for RPL36P17 Gene

Regulatory Elements for RPL36P17 Gene

Enhancers for RPL36P17 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22F031052 1.1 Ensembl ENCODE 16.2 -949.5 -949548 4.3 PKNOX1 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 SLC30A9 FOS ENSG00000223831 SELENOM MORC2-AS1 ENSG00000214125 LOC105372988 RPL36P17 ENSG00000227813 LOC105372999 RPS3AP51 RN7SL305P
GH22F029381 1.2 Ensembl ENCODE 16.2 +720.0 720004 8.1 HDGF PKNOX1 ARNT CREB3L1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 RASL10A AP1B1 RPL36P17 RPS3AP51 LOC105372988 SNORD125 GAS2L1 RHBDD3 LOC102723305 MIR3653
GH22F030105 0.2 Ensembl 0.8 +0.2 208 0.4 HORMAD2-AS1 LIF OSM LOC105372988 ENSG00000232530 GATSL3 ENSG00000249590 SEC14L2 RPL36P17
GH22F030108 0.2 ENCODE 0.8 -3.3 -3276 0.7 ATF1 YBX1 DMAP1 ZSCAN9 ZNF2 RAD21 ZNF48 RARA ZNF121 ZNF366 MORC2 TUG1 THOC5 ASCC2 HORMAD2-AS1 MGC20647 RPL36P17 RPS3AP51
GH22F030111 0.7 FANTOM5 0.4 -6.2 -6153 0.0 LIF RPL36P17 RPS3AP51
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL36P17 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL36P17 Gene

Chromosome:
22
Start:
30,105,094 bp from pter
End:
30,105,408 bp from pter
Size:
315 bases
Orientation:
Minus strand

Genomic View for RPL36P17 Gene

Genes around RPL36P17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36P17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36P17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36P17 Gene

Proteins for RPL36P17 Gene

Post-translational modifications for RPL36P17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36P17 Gene

Domains & Families for RPL36P17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36P17 Gene

Function for RPL36P17 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36P17 Gene

Localization for RPL36P17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL36P17 Gene

Pathways & Interactions for RPL36P17 Gene

SuperPathways for RPL36P17 Gene

No Data Available

Interacting Proteins for RPL36P17 Gene

Gene Ontology (GO) - Biological Process for RPL36P17 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36P17 Gene

Transcripts for RPL36P17 Gene

mRNA/cDNA for RPL36P17 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36P17 Gene

No ASD Table

Relevant External Links for RPL36P17 Gene

GeneLoc Exon Structure for
RPL36P17
ECgene alternative splicing isoforms for
RPL36P17

Expression for RPL36P17 Gene

mRNA expression in normal human tissues for RPL36P17 Gene

mRNA differential expression in normal tissues according to GTEx for RPL36P17 Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of RPL36P17 Gene:

RPL36P17
genes like me logo Genes that share expression patterns with RPL36P17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL36P17 Gene

Orthologs for RPL36P17 Gene

Evolution for RPL36P17 Gene

ENSEMBL:
Gene Tree for RPL36P17 (if available)
TreeFam:
Gene Tree for RPL36P17 (if available)

No data available for Orthologs for RPL36P17 Gene

Paralogs for RPL36P17 Gene

No data available for Paralogs for RPL36P17 Gene

Variants for RPL36P17 Gene

Relevant External Links for RPL36P17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36P17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36P17 Gene

Disorders for RPL36P17 Gene

No disorders were found for RPL36P17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36P17 Gene

Publications for RPL36P17 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL36P17 Gene

Sources for RPL36P17 Gene

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