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Aliases for RPL36P11 Gene

Subcategory (RNA class) for RPL36P11 Gene

lncRNA

Aliases for RPL36P11 Gene

  • Ribosomal Protein L36 Pseudogene 11 2 3
  • RP11-515C16.1 5
  • RPL36_1_620 3

External Ids for RPL36P11 Gene

ORGUL Members for RPL36P11 Gene

Previous GeneCards Identifiers for RPL36P11 Gene

  • GC05U901083
  • GC05P139989
  • GC05P141462
  • GC05P141578
  • GC05P141678
  • GC05P141780

Summaries for RPL36P11 Gene

GeneCards Summary for RPL36P11 Gene

RPL36P11 (Ribosomal Protein L36 Pseudogene 11) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36P11 Gene

Genomics for RPL36P11 Gene

Regulatory Elements for RPL36P11 Gene

Enhancers for RPL36P11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F140606 1.2 FANTOM5 Ensembl 0.8 -2.1 -2052 0.9 ELF3 ARID4B ZSCAN9 RAD21 RARA YY1 SLC30A9 CREM MIXL1 THAP11 APBB3 SRA1 CD14 SLC35A4 MIR6831 EIF4EBP3 MIR3655 NDUFA2 IK HBEGF
GH05F140608 1.2 FANTOM5 Ensembl ENCODE 0.8 +1.9 1916 4.4 PKNOX1 ARNT CBX5 GATA2 NCOA1 MEF2D SMARCA4 PBX2 MYNN NBN CD14 APBB3 TMCO6 SLC35A4 IK EIF4EBP3 ANKHD1 MIR6831 NDUFA2 MIR3655
GH05F140604 0.3 FANTOM5 0.8 -4.5 -4467 0.4 APBB3 MIR6831 SLC35A4 MIR3655 NDUFA2 IK EIF4EBP3 RPL36P11 TMCO6
GH05F140609 0.5 Ensembl 0.8 -1.0 -985 0.2 ZIC2 CD14 APBB3 MIR6831 SLC35A4 EIF4EBP3 RPL36P11 TMCO6
GH05F140601 1.3 FANTOM5 Ensembl ENCODE 0.4 -6.5 -6490 2.0 HDAC1 MLX SIN3A YY1 EGR2 THAP11 ZNF263 USF2 CEBPB ZNF589 APBB3 CD14 TMCO6 SRA1 SLC35A4 MIR6831 MIR3655 IK NDUFA2 EIF4EBP3
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL36P11 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL36P11 Gene

Chromosome:
5
Start:
140,609,085 bp from pter
End:
140,609,403 bp from pter
Size:
319 bases
Orientation:
Plus strand

Genomic View for RPL36P11 Gene

Genes around RPL36P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36P11 Gene

Proteins for RPL36P11 Gene

Post-translational modifications for RPL36P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36P11 Gene

Domains & Families for RPL36P11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36P11 Gene

Function for RPL36P11 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36P11 Gene

Localization for RPL36P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL36P11 Gene

Pathways & Interactions for RPL36P11 Gene

SuperPathways for RPL36P11 Gene

No Data Available

Interacting Proteins for RPL36P11 Gene

Gene Ontology (GO) - Biological Process for RPL36P11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36P11 Gene

Transcripts for RPL36P11 Gene

mRNA/cDNA for RPL36P11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36P11 Gene

No ASD Table

Relevant External Links for RPL36P11 Gene

GeneLoc Exon Structure for
RPL36P11
ECgene alternative splicing isoforms for
RPL36P11

Expression for RPL36P11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL36P11 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL36P11 Gene:

RPL36P11
genes like me logo Genes that share expression patterns with RPL36P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL36P11 Gene

Orthologs for RPL36P11 Gene

Evolution for RPL36P11 Gene

ENSEMBL:
Gene Tree for RPL36P11 (if available)
TreeFam:
Gene Tree for RPL36P11 (if available)

No data available for Orthologs for RPL36P11 Gene

Paralogs for RPL36P11 Gene

No data available for Paralogs for RPL36P11 Gene

Variants for RPL36P11 Gene

Relevant External Links for RPL36P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36P11 Gene

Disorders for RPL36P11 Gene

No disorders were found for RPL36P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36P11 Gene

Publications for RPL36P11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3 64

Products for RPL36P11 Gene

Sources for RPL36P11 Gene

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