Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL36P11 Gene

Subcategory (RNA class) for RPL36P11 Gene

lncRNA

Aliases for RPL36P11 Gene

  • Ribosomal Protein L36 Pseudogene 11 2 3
  • RPL36_1_620 3
  • AC116353.1 5

External Ids for RPL36P11 Gene

ORGUL Members for RPL36P11 Gene

Previous GeneCards Identifiers for RPL36P11 Gene

  • GC05U901083
  • GC05P139989
  • GC05P141462
  • GC05P141578
  • GC05P141678
  • GC05P141780
  • GC05P141880
  • GC05P141988
  • GC05P142089

Summaries for RPL36P11 Gene

GeneCards Summary for RPL36P11 Gene

RPL36P11 (Ribosomal Protein L36 Pseudogene 11) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL36P11 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36P11 Gene

Genomics for RPL36P11 Gene

GeneHancer (GH) Regulatory Elements for RPL36P11 Gene

Promoters and enhancers for RPL36P11 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I140609 Enhancer 1.5 FANTOM5 Ensembl ENCODE 550.8 +1.8 1815 3.8 PKNOX1 ATF1 FOXA2 ARNT ZNF280A TCF12 ZNF766 CBX5 GATA2 E2F8 RPL36P11 CD14 APBB3 TMCO6 SLC35A4 IK EIF4EBP3 ANKHD1 NDUFA2 SRA1
GH05I140607 Enhancer 1.2 FANTOM5 Ensembl 550.8 -1.8 -1752 0.3 FOXA2 ARID4B ETS1 YY1 SLC30A9 ATF7 RXRA SP5 REST PPARG RPL36P11 APBB3 CD14 SLC35A4 EIF4EBP3 IK NDUFA2 HBEGF SRA1 ANKHD1
GH05I140608 Enhancer 0.2 FANTOM5 550.8 -0.2 -173 0.1 RPL36P11 CD14 APBB3 IK SLC35A4 EIF4EBP3 NDUFA2 ANKHD1 SRA1 HBEGF
GH05I140630 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.3 +23.0 22979 3.5 ELF3 PKNOX1 FOXA2 NEUROD1 THRB RAD21 RARA YY1 FOS RCOR1 CD14 SRA1 TMCO6 APBB3 RPL36P11
GH05I140601 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 -6.5 -6490 2 FOXA2 TAF1 MLX MAX ZNF384 CEBPG YY1 POLR2A NFE2 THAP11 APBB3 CD14 SRA1 TMCO6 SLC35A4 IK NDUFA2 EIF4EBP3 HBEGF ANKHD1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL36P11 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL36P11 Gene

Genomic Locations for RPL36P11 Gene
chr5:140,609,085-140,609,403
(GRCh38/hg38)
Size:
319 bases
Orientation:
Plus strand
chr5:139,988,670-139,988,988
(GRCh37/hg19)

Genomic View for RPL36P11 Gene

Genes around RPL36P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36P11 Gene

Proteins for RPL36P11 Gene

Post-translational modifications for RPL36P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36P11 Gene

Domains & Families for RPL36P11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36P11 Gene

Function for RPL36P11 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36P11 Gene

Localization for RPL36P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL36P11 Gene

Pathways & Interactions for RPL36P11 Gene

SuperPathways for RPL36P11 Gene

No Data Available

Interacting Proteins for RPL36P11 Gene

Gene Ontology (GO) - Biological Process for RPL36P11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36P11 Gene

Drugs & Compounds for RPL36P11 Gene

No Compound Related Data Available

Transcripts for RPL36P11 Gene

mRNA/cDNA for RPL36P11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36P11 Gene

No ASD Table

Relevant External Links for RPL36P11 Gene

GeneLoc Exon Structure for
RPL36P11
ECgene alternative splicing isoforms for
RPL36P11

Expression for RPL36P11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL36P11 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL36P11 Gene:

RPL36P11
genes like me logo Genes that share expression patterns with RPL36P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36P11 Gene

Orthologs for RPL36P11 Gene

Evolution for RPL36P11 Gene

ENSEMBL:
Gene Tree for RPL36P11 (if available)
TreeFam:
Gene Tree for RPL36P11 (if available)

No data available for Orthologs for RPL36P11 Gene

Paralogs for RPL36P11 Gene

No data available for Paralogs for RPL36P11 Gene

Variants for RPL36P11 Gene

Additional Variant Information for RPL36P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36P11 Gene

Disorders for RPL36P11 Gene

No disorders were found for RPL36P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36P11 Gene

Publications for RPL36P11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 58

Products for RPL36P11 Gene

Sources for RPL36P11 Gene

Content
Loading form....