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Aliases for RPL36P1 Gene

Subcategory (RNA class) for RPL36P1 Gene

lncRNA

Aliases for RPL36P1 Gene

  • Ribosomal Protein L36 Pseudogene 1 2 3 5
  • RPL36_9_1713 3
  • BA80K6.3 3

External Ids for RPL36P1 Gene

ORGUL Members for RPL36P1 Gene

Previous GeneCards Identifiers for RPL36P1 Gene

  • GC20U990116
  • GC20P052145
  • GC20P052192
  • GC20P050940
  • GC20P051507
  • GC20P048252

Summaries for RPL36P1 Gene

GeneCards Summary for RPL36P1 Gene

RPL36P1 (Ribosomal Protein L36 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36P1 Gene

Genomics for RPL36P1 Gene

Regulatory Elements for RPL36P1 Gene

Enhancers for RPL36P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20G052859 0.6 ENCODE 0.3 -30.7 -30746 0.6 STAT1 MAX CEBPB REST RAD21 GABPA JUND HNF4A GC20M052843 RPL36P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL36P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL36P1 Gene

Chromosome:
20
Start:
52,890,157 bp from pter
End:
52,890,386 bp from pter
Size:
230 bases
Orientation:
Plus strand

Genomic View for RPL36P1 Gene

Genes around RPL36P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36P1 Gene

Proteins for RPL36P1 Gene

Post-translational modifications for RPL36P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36P1 Gene

Domains & Families for RPL36P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36P1 Gene

Function for RPL36P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36P1 Gene

Localization for RPL36P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL36P1 Gene

Pathways & Interactions for RPL36P1 Gene

SuperPathways for RPL36P1 Gene

No Data Available

Interacting Proteins for RPL36P1 Gene

Gene Ontology (GO) - Biological Process for RPL36P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36P1 Gene

Drugs & Compounds for RPL36P1 Gene

No Compound Related Data Available

Transcripts for RPL36P1 Gene

mRNA/cDNA for RPL36P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36P1 Gene

No ASD Table

Relevant External Links for RPL36P1 Gene

GeneLoc Exon Structure for
RPL36P1
ECgene alternative splicing isoforms for
RPL36P1

Expression for RPL36P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL36P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL36P1 Gene:

RPL36P1
genes like me logo Genes that share expression patterns with RPL36P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36P1 Gene

Orthologs for RPL36P1 Gene

Evolution for RPL36P1 Gene

ENSEMBL:
Gene Tree for RPL36P1 (if available)
TreeFam:
Gene Tree for RPL36P1 (if available)

No data available for Orthologs for RPL36P1 Gene

Paralogs for RPL36P1 Gene

No data available for Paralogs for RPL36P1 Gene

Variants for RPL36P1 Gene

Relevant External Links for RPL36P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36P1 Gene

Disorders for RPL36P1 Gene

Relevant External Links for RPL36P1

Genetic Association Database (GAD)
RPL36P1

No disorders were found for RPL36P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL36P1 Gene

Publications for RPL36P1 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q. … O'Donnell C.J. (BMC Med. Genet. 2007) 46 64
  3. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel D.P. … Karasik D. (BMC Med. Genet. 2007) 46 64

Products for RPL36P1 Gene

Sources for RPL36P1 Gene

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