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Aliases for RPL36AP6 Gene

Aliases for RPL36AP6 Gene

  • Ribosomal Protein L36a Pseudogene 6 2 3 5
  • RPL36A_12_1002 3
  • BA380I20.1 3

External Ids for RPL36AP6 Gene

Previous GeneCards Identifiers for RPL36AP6 Gene

  • GC09U900699
  • GC09M109637
  • GC09M110596
  • GC09M080195

Summaries for RPL36AP6 Gene

GeneCards Summary for RPL36AP6 Gene

RPL36AP6 (Ribosomal Protein L36a Pseudogene 6) is a Pseudogene.

Additional gene information for RPL36AP6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36AP6 Gene

Genomics for RPL36AP6 Gene

GeneHancer (GH) Regulatory Elements for RPL36AP6 Gene

Promoters and enhancers for RPL36AP6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I107826 Enhancer 0.9 FANTOM5 ENCODE 0.4 +7.4 7363 1.2 RFX1 L3MBTL2 BHLHE40 ZBTB5 CC2D1A BCL6B IKZF1 ZNF24 KDM1A MGA RNU6-1064P KLF4 RPL36AP6 RN7SL659P
GH09I107819 Enhancer 0.7 ENCODE 0.4 +14.9 14900 0.9 NCOA3 ESRRA NFIB INSM2 SIN3A ZIC2 ZNF324 CTBP1 GATA3 POLR2A RNU6-996P RN7SL659P RPL36AP6
GH09I107848 Enhancer 0.4 Ensembl ENCODE 0.4 -13.7 -13650 1 ENSG00000233727 RPL36AP6
GH09I107820 Enhancer 0.4 FANTOM5 0.4 +14.1 14066 0.2 ZNF512B POLR2A RNU6-996P RN7SL659P RPL36AP6
GH09I107841 Enhancer 0.3 FANTOM5 0.4 -6.4 -6418 0.2 KLF4 RPL36AP6 ENSG00000233727
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL36AP6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL36AP6 Gene

Genomic Locations for RPL36AP6 Gene
chr9:107,834,457-107,834,856
(GRCh38/hg38)
Size:
400 bases
Orientation:
Minus strand
chr9:110,596,738-110,597,137
(GRCh37/hg19)

Genomic View for RPL36AP6 Gene

Genes around RPL36AP6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP6 Gene

Proteins for RPL36AP6 Gene

Post-translational modifications for RPL36AP6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP6 Gene

Domains & Families for RPL36AP6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36AP6 Gene

Function for RPL36AP6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP6 Gene

Localization for RPL36AP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL36AP6 Gene

Pathways & Interactions for RPL36AP6 Gene

SuperPathways for RPL36AP6 Gene

No Data Available

Interacting Proteins for RPL36AP6 Gene

Gene Ontology (GO) - Biological Process for RPL36AP6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36AP6 Gene

Drugs & Compounds for RPL36AP6 Gene

No Compound Related Data Available

Transcripts for RPL36AP6 Gene

mRNA/cDNA for RPL36AP6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP6 Gene

No ASD Table

Relevant External Links for RPL36AP6 Gene

GeneLoc Exon Structure for
RPL36AP6
ECgene alternative splicing isoforms for
RPL36AP6

Expression for RPL36AP6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL36AP6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL36AP6 Gene:

RPL36AP6
genes like me logo Genes that share expression patterns with RPL36AP6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36AP6 Gene

Orthologs for RPL36AP6 Gene

Evolution for RPL36AP6 Gene

ENSEMBL:
Gene Tree for RPL36AP6 (if available)
TreeFam:
Gene Tree for RPL36AP6 (if available)

No data available for Orthologs for RPL36AP6 Gene

Paralogs for RPL36AP6 Gene

No data available for Paralogs for RPL36AP6 Gene

Variants for RPL36AP6 Gene

Additional Variant Information for RPL36AP6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP6 Gene

Disorders for RPL36AP6 Gene

Additional Disease Information for RPL36AP6

Genetic Association Database
(GAD)

No disorders were found for RPL36AP6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL36AP6 Gene

Publications for RPL36AP6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL36AP6 Gene

Sources for RPL36AP6 Gene

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