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Aliases for RPL36AP49 Gene

Aliases for RPL36AP49 Gene

  • Ribosomal Protein L36a Pseudogene 49 2 3
  • RPL36A_23_1584 3
  • RP11-681N23.1 5

External Ids for RPL36AP49 Gene

Previous GeneCards Identifiers for RPL36AP49 Gene

  • GC18M013911

Summaries for RPL36AP49 Gene

GeneCards Summary for RPL36AP49 Gene

RPL36AP49 (Ribosomal Protein L36a Pseudogene 49) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36AP49 Gene

Genomics for RPL36AP49 Gene

Genomic Location for RPL36AP49 Gene

Chromosome:
18
Start:
13,919,573 bp from pter
End:
13,919,980 bp from pter
Size:
408 bases
Orientation:
Minus strand

Genomic View for RPL36AP49 Gene

Genes around RPL36AP49 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP49 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP49 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP49 Gene

No data available for Regulatory Elements for RPL36AP49 Gene

Proteins for RPL36AP49 Gene

Post-translational modifications for RPL36AP49 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP49 Gene

Domains & Families for RPL36AP49 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36AP49 Gene

Function for RPL36AP49 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP49 Gene

Localization for RPL36AP49 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL36AP49 Gene

Pathways & Interactions for RPL36AP49 Gene

SuperPathways for RPL36AP49 Gene

No Data Available

Interacting Proteins for RPL36AP49 Gene

Gene Ontology (GO) - Biological Process for RPL36AP49 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36AP49 Gene

Drugs & Compounds for RPL36AP49 Gene

No Compound Related Data Available

Transcripts for RPL36AP49 Gene

mRNA/cDNA for RPL36AP49 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP49 Gene

No ASD Table

Relevant External Links for RPL36AP49 Gene

GeneLoc Exon Structure for
RPL36AP49
ECgene alternative splicing isoforms for
RPL36AP49

Expression for RPL36AP49 Gene

mRNA expression in normal human tissues for RPL36AP49 Gene

genes like me logo Genes that share expression patterns with RPL36AP49: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for RPL36AP49 Gene

Orthologs for RPL36AP49 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for RPL36AP49 Gene

Organism Taxonomy Gene Similarity Type Details
barley
(Hordeum vulgare)
Liliopsida Hv.12372 35
Species with no ortholog for RPL36AP49:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RPL36AP49 Gene

ENSEMBL:
Gene Tree for RPL36AP49 (if available)
TreeFam:
Gene Tree for RPL36AP49 (if available)

Paralogs for RPL36AP49 Gene

No data available for Paralogs for RPL36AP49 Gene

Variants for RPL36AP49 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for RPL36AP49 Gene

Disorders for RPL36AP49 Gene

No disorders were found for RPL36AP49 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36AP49 Gene

Publications for RPL36AP49 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 67

Products for RPL36AP49 Gene

Sources for RPL36AP49 Gene

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