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Aliases for RPL36AP48 Gene

Aliases for RPL36AP48 Gene

  • Ribosomal Protein L36a Pseudogene 48 2 3 5
  • RPL36A_23_1571 3

External Ids for RPL36AP48 Gene

Previous GeneCards Identifiers for RPL36AP48 Gene

  • GC17P062653
  • GC17P065222

Summaries for RPL36AP48 Gene

GeneCards Summary for RPL36AP48 Gene

RPL36AP48 (Ribosomal Protein L36a Pseudogene 48) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36AP48 Gene

Genomics for RPL36AP48 Gene

Regulatory Elements for RPL36AP48 Gene

Enhancers for RPL36AP48 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F067364 0.5 ENCODE 16.2 +141.1 141059 3.1 HDGF PKNOX1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF143 NOL11 ENSG00000264421 RPL36AP48 FBXO36P1 HELZ PRKCA-AS1 PSMD12 GC17M067328
GH17F067518 0.9 FANTOM5 Ensembl ENCODE 16.2 +295.7 295701 3.6 PKNOX1 FEZF1 ETS1 ZNF263 SP5 ZNF488 NFIL3 GLIS1 MYNN WT1 ENSG00000264421 RPL36AP48 FBXO36P1 LOC100418928 ENSG00000266717 NOL11 LRRC37A16P PITPNC1 ENSG00000264754 MIR548D2
GH17F066301 1 ENCODE 16.2 -920.6 -920561 4.7 HDGF ARID4B SIN3A FEZF1 DMAP1 ZNF2 SLC30A9 ZNF207 ZNF263 SP3 PRKCA ENSG00000270870 ENSG00000264421 RPL36AP48 PRKCA-AS1 RN7SL735P
GH17F067585 0.6 ENCODE 16.2 +360.5 360539 1.1 PKNOX1 INSM2 FEZF1 KLF7 ZNF548 ZNF645 ZEB2 ZNF488 ZNF843 ZNF217 NOL11 ENSG00000264421 RPL36AP48 FBXO36P1 HELZ GC17P067605 ENSG00000264754
GH17F067824 0.7 FANTOM5 ENCODE 16.2 +601.4 601429 3.7 HDGF PKNOX1 CREB3L1 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 LOC100418928 NOL11 FBXO36P1 ENSG00000264421 RPL36AP48 HELZ SH3GL1P3 ENSG00000267731 LINC00674 ENSG00000265055
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL36AP48 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL36AP48 Gene

Chromosome:
17
Start:
67,224,700 bp from pter
End:
67,225,086 bp from pter
Size:
387 bases
Orientation:
Plus strand

Genomic View for RPL36AP48 Gene

Genes around RPL36AP48 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP48 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP48 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP48 Gene

Proteins for RPL36AP48 Gene

Post-translational modifications for RPL36AP48 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP48 Gene

Domains & Families for RPL36AP48 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36AP48 Gene

Function for RPL36AP48 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP48 Gene

Localization for RPL36AP48 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL36AP48 Gene

Pathways & Interactions for RPL36AP48 Gene

SuperPathways for RPL36AP48 Gene

No Data Available

Interacting Proteins for RPL36AP48 Gene

Gene Ontology (GO) - Biological Process for RPL36AP48 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36AP48 Gene

Transcripts for RPL36AP48 Gene

mRNA/cDNA for RPL36AP48 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP48 Gene

No ASD Table

Relevant External Links for RPL36AP48 Gene

GeneLoc Exon Structure for
RPL36AP48
ECgene alternative splicing isoforms for
RPL36AP48

Expression for RPL36AP48 Gene

mRNA expression in normal human tissues for RPL36AP48 Gene

mRNA differential expression in normal tissues according to GTEx for RPL36AP48 Gene

This gene is overexpressed in Testis (x51.6).

NURSA nuclear receptor signaling pathways regulating expression of RPL36AP48 Gene:

RPL36AP48
genes like me logo Genes that share expression patterns with RPL36AP48: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL36AP48 Gene

Orthologs for RPL36AP48 Gene

Evolution for RPL36AP48 Gene

ENSEMBL:
Gene Tree for RPL36AP48 (if available)
TreeFam:
Gene Tree for RPL36AP48 (if available)

No data available for Orthologs for RPL36AP48 Gene

Paralogs for RPL36AP48 Gene

No data available for Paralogs for RPL36AP48 Gene

Variants for RPL36AP48 Gene

Relevant External Links for RPL36AP48 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP48

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP48 Gene

Disorders for RPL36AP48 Gene

No disorders were found for RPL36AP48 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36AP48 Gene

Publications for RPL36AP48 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL36AP48 Gene

Sources for RPL36AP48 Gene

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