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Aliases for RPL36AP43 Gene

Aliases for RPL36AP43 Gene

  • Ribosomal Protein L36a Pseudogene 43 2 3
  • RPL36A_21_1460 3
  • AC013787.1 5

External Ids for RPL36AP43 Gene

Previous GeneCards Identifiers for RPL36AP43 Gene

  • GC15U901023
  • GC15M090232

Summaries for RPL36AP43 Gene

GeneCards Summary for RPL36AP43 Gene

RPL36AP43 (Ribosomal Protein L36a Pseudogene 43) is a Pseudogene.

Additional gene information for RPL36AP43 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36AP43 Gene

Genomics for RPL36AP43 Gene

Regulatory Elements for RPL36AP43 Gene

Enhancers for RPL36AP43 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15H089383 1.2 ENCODE dbSUPER 56.7 +304.6 304576 0 FEZF1 ZNF2 GLIS2 ZNF302 YY2 TSHZ1 ZNF662 ZNF491 ZNF610 GLIS1 RPL36AP43 NIFKP5 ENSG00000173867 ARPIN POLG DET1 ENSG00000228998 MIR9-3HG GC15P089381 PIR56199
GH15H089892 1.2 ENCODE 22.7 -205.6 -205628 2 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC ZC3H11A ENSG00000259314 POLG NIFKP5 CRTC3 FANCI ENSG00000259212 RPL36AP43 KIF7 ARPIN LOC100631255
GH15H090398 2 FANTOM5 Ensembl ENCODE dbSUPER 12 -715.5 -715521 11 HDGF PKNOX1 FOXA2 ARID4B SIN3A FEZF1 ZNF766 FOS JUNB MIER3 IQGAP1 ZNF774 CRTC3 LOC100631255 UNC45A RPL36AP43 ENSG00000259212 GABARAPL3 VPS33B ARPIN
GH15H090647 2 FANTOM5 Ensembl ENCODE dbSUPER 11.8 -961.1 -961073 4 HDGF PKNOX1 ARNT YY1 ZNF766 ZNF143 ZNF207 FOS SP3 REST ENSG00000259314 UNC45A ENSG00000259212 RPL36AP43 BLM CRTC3 ENSG00000200677 GABARAPL3 ZNF774 FES
GH15H090157 2 FANTOM5 Ensembl ENCODE dbSUPER 11.7 -475.3 -475262 12 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A DMAP1 YBX1 ZNF2 CIB1 RCCD1 SEMA4B RPL36AP43 GDPGP1 NGRN ENSG00000259314 UNC45A GABARAPL3 ZNF774
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL36AP43 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL36AP43 Gene

Chromosome:
15
Start:
89,687,882 bp from pter
End:
89,688,280 bp from pter
Size:
399 bases
Orientation:
Minus strand

Genomic View for RPL36AP43 Gene

Genes around RPL36AP43 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP43 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP43 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP43 Gene

Proteins for RPL36AP43 Gene

Post-translational modifications for RPL36AP43 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP43 Gene

Domains & Families for RPL36AP43 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36AP43 Gene

Function for RPL36AP43 Gene

Phenotypes From GWAS Catalog for RPL36AP43 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL36AP43
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP43 Gene

Localization for RPL36AP43 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL36AP43 Gene

Pathways & Interactions for RPL36AP43 Gene

SuperPathways for RPL36AP43 Gene

No Data Available

Interacting Proteins for RPL36AP43 Gene

Gene Ontology (GO) - Biological Process for RPL36AP43 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36AP43 Gene

Drugs & Compounds for RPL36AP43 Gene

No Compound Related Data Available

Transcripts for RPL36AP43 Gene

mRNA/cDNA for RPL36AP43 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL36AP43
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP43 Gene

No ASD Table

Relevant External Links for RPL36AP43 Gene

GeneLoc Exon Structure for
RPL36AP43
ECgene alternative splicing isoforms for
RPL36AP43

Expression for RPL36AP43 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL36AP43 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL36AP43 Gene:

RPL36AP43
genes like me logo Genes that share expression patterns with RPL36AP43: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36AP43 Gene

Orthologs for RPL36AP43 Gene

Evolution for RPL36AP43 Gene

ENSEMBL:
Gene Tree for RPL36AP43 (if available)
TreeFam:
Gene Tree for RPL36AP43 (if available)

No data available for Orthologs for RPL36AP43 Gene

Paralogs for RPL36AP43 Gene

No data available for Paralogs for RPL36AP43 Gene

Variants for RPL36AP43 Gene

Relevant External Links for RPL36AP43 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP43

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP43 Gene

Disorders for RPL36AP43 Gene

No disorders were found for RPL36AP43 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36AP43 Gene

Publications for RPL36AP43 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPL36AP43 Gene

Sources for RPL36AP43 Gene

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