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Aliases for RPL36AP40 Gene

Aliases for RPL36AP40 Gene

  • Ribosomal Protein L36a Pseudogene 40 2 3 5
  • RPL36A_15_1127 3

External Ids for RPL36AP40 Gene

Previous GeneCards Identifiers for RPL36AP40 Gene

  • GC11M025305

Summaries for RPL36AP40 Gene

GeneCards Summary for RPL36AP40 Gene

RPL36AP40 (Ribosomal Protein L36a Pseudogene 40) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36AP40 Gene

Genomics for RPL36AP40 Gene

Regulatory Elements for RPL36AP40 Gene

Enhancers for RPL36AP40 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F025579 0.4 ENCODE 0.4 +9.1 9113 1.4 SMARCA4 POLR2A RPL36AP40 PIR37235
GH11F025562 0.4 ENCODE 0.3 +26.3 26277 0.2 RAD21 RPL36AP40 PIR37235
GH11F025601 0.2 ENCODE 0.4 -13.3 -13270 0.7 RPL36AP40 ENSG00000255454
GH11F025536 0.2 ENCODE 0.2 +52.4 52377 0.2 PIR37235 RPL36AP40
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL36AP40 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL36AP40 Gene

Chromosome:
11
Start:
25,588,365 bp from pter
End:
25,588,866 bp from pter
Size:
502 bases
Orientation:
Minus strand

Genomic View for RPL36AP40 Gene

Genes around RPL36AP40 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP40 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP40 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP40 Gene

Proteins for RPL36AP40 Gene

Post-translational modifications for RPL36AP40 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP40 Gene

Domains & Families for RPL36AP40 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36AP40 Gene

Function for RPL36AP40 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP40 Gene

Localization for RPL36AP40 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL36AP40 Gene

Pathways & Interactions for RPL36AP40 Gene

SuperPathways for RPL36AP40 Gene

No Data Available

Interacting Proteins for RPL36AP40 Gene

Gene Ontology (GO) - Biological Process for RPL36AP40 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36AP40 Gene

Transcripts for RPL36AP40 Gene

mRNA/cDNA for RPL36AP40 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RPL36AP40 Gene

Ribosomal protein L36a pseudogene 40:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP40 Gene

No ASD Table

Relevant External Links for RPL36AP40 Gene

GeneLoc Exon Structure for
RPL36AP40
ECgene alternative splicing isoforms for
RPL36AP40

Expression for RPL36AP40 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL36AP40 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL36AP40 Gene:

RPL36AP40

SOURCE GeneReport for Unigene cluster for RPL36AP40 Gene:

Hs.502159
genes like me logo Genes that share expression patterns with RPL36AP40: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL36AP40 Gene

Orthologs for RPL36AP40 Gene

Evolution for RPL36AP40 Gene

ENSEMBL:
Gene Tree for RPL36AP40 (if available)
TreeFam:
Gene Tree for RPL36AP40 (if available)

No data available for Orthologs for RPL36AP40 Gene

Paralogs for RPL36AP40 Gene

No data available for Paralogs for RPL36AP40 Gene

Variants for RPL36AP40 Gene

Relevant External Links for RPL36AP40 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP40

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP40 Gene

Disorders for RPL36AP40 Gene

Relevant External Links for RPL36AP40

Genetic Association Database (GAD)
RPL36AP40
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RPL36AP40

No disorders were found for RPL36AP40 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL36AP40 Gene

Publications for RPL36AP40 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox C.S. … Atwood L.D. (BMC Med. Genet. 2007) 46 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
  4. A complete map of the human ribosomal protein genes: assignment of 80 genes to the cytogenetic map and implications for human disorders. (PMID: 11401437) Uechi T. … Kenmochi N. (Genomics 2001) 3 64

Products for RPL36AP40 Gene

Sources for RPL36AP40 Gene

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