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Aliases for RPL36AP35 Gene

Subcategory (RNA class) for RPL36AP35 Gene

lncRNA

Aliases for RPL36AP35 Gene

  • Ribosomal Protein L36a Pseudogene 35 2 3 5
  • RPL36A_16_1006 3

External Ids for RPL36AP35 Gene

ORGUL Members for RPL36AP35 Gene

Previous GeneCards Identifiers for RPL36AP35 Gene

  • GC09U901232
  • GC09P111584

Summaries for RPL36AP35 Gene

GeneCards Summary for RPL36AP35 Gene

RPL36AP35 (Ribosomal Protein L36a Pseudogene 35) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36AP35 Gene

Genomics for RPL36AP35 Gene

Regulatory Elements for RPL36AP35 Gene

Enhancers for RPL36AP35 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G108815 1 FANTOM5 Ensembl 0.4 -5.3 -5335 0.9 ELF3 SOX5 SOX13 SP5 ARID4B PPARG ATF2 ZNF7 ZFHX2 EGR1 ACTL7A RPL36AP35 PIR55739
GH09G108786 1.1 Ensembl ENCODE 0.3 -34.2 -34190 2.1 INSM2 ZNF76 FEZF1 ZNF366 FOS KLF7 ZNF548 SMARCC1 CEBPB ZEB2 ELP1 RPL36AP35 PIR55739
GH09G108783 0.8 Ensembl ENCODE 0.3 -38.0 -37971 1.5 ELF3 TFAP4 SAP130 POLR2A SMARCA4 CTNNAL1 ELP1 RPL36AP35 PIR55739
GH09G108776 0.7 ENCODE 0.3 -44.6 -44642 0.2 HDAC1 SCRT1 ESRRA NFIA ZNF644 ZNF7 NFIC RUNX1 SCRT2 KDM1A PIR55739 RPL36AP35
GH09G108777 0.9 ENCODE 0.2 -45.5 -45525 0.2 FOXA2 ARID4B THRB RARA GATA4 CREM MIXL1 THAP11 HMG20B SP5 PIR55739 RPL36AP35
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL36AP35 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL36AP35 Gene

Chromosome:
9
Start:
108,821,697 bp from pter
End:
108,822,018 bp from pter
Size:
322 bases
Orientation:
Plus strand

Genomic View for RPL36AP35 Gene

Genes around RPL36AP35 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP35 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP35 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP35 Gene

Proteins for RPL36AP35 Gene

Post-translational modifications for RPL36AP35 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP35 Gene

Domains & Families for RPL36AP35 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36AP35 Gene

Function for RPL36AP35 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP35 Gene

Localization for RPL36AP35 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL36AP35 Gene

Pathways & Interactions for RPL36AP35 Gene

SuperPathways for RPL36AP35 Gene

No Data Available

Interacting Proteins for RPL36AP35 Gene

Gene Ontology (GO) - Biological Process for RPL36AP35 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36AP35 Gene

Drugs & Compounds for RPL36AP35 Gene

No Compound Related Data Available

Transcripts for RPL36AP35 Gene

mRNA/cDNA for RPL36AP35 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP35 Gene

No ASD Table

Relevant External Links for RPL36AP35 Gene

GeneLoc Exon Structure for
RPL36AP35
ECgene alternative splicing isoforms for
RPL36AP35

Expression for RPL36AP35 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL36AP35 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL36AP35 Gene:

RPL36AP35
genes like me logo Genes that share expression patterns with RPL36AP35: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36AP35 Gene

Orthologs for RPL36AP35 Gene

Evolution for RPL36AP35 Gene

ENSEMBL:
Gene Tree for RPL36AP35 (if available)
TreeFam:
Gene Tree for RPL36AP35 (if available)

No data available for Orthologs for RPL36AP35 Gene

Paralogs for RPL36AP35 Gene

No data available for Paralogs for RPL36AP35 Gene

Variants for RPL36AP35 Gene

Relevant External Links for RPL36AP35 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP35

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP35 Gene

Disorders for RPL36AP35 Gene

No disorders were found for RPL36AP35 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36AP35 Gene

Publications for RPL36AP35 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL36AP35 Gene

Sources for RPL36AP35 Gene

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