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Aliases for RPL36AP30 Gene

Subcategory (RNA class) for RPL36AP30 Gene

antisense

Aliases for RPL36AP30 Gene

  • Ribosomal Protein L36a Pseudogene 30 2 3
  • RPL36A_11_867 3
  • RP5-1142J19.2 5

External Ids for RPL36AP30 Gene

ORGUL Members for RPL36AP30 Gene

Previous GeneCards Identifiers for RPL36AP30 Gene

  • GC07U902582
  • GC07M157056

Summaries for RPL36AP30 Gene

GeneCards Summary for RPL36AP30 Gene

RPL36AP30 (Ribosomal Protein L36a Pseudogene 30) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36AP30 Gene

Genomics for RPL36AP30 Gene

Regulatory Elements for RPL36AP30 Gene

Enhancers for RPL36AP30 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F157306 1.1 Ensembl ENCODE 10.1 -44.4 -44375 1.6 BCOR TBP HDAC1 KLF1 ZNF146 PKNOX1 DDX20 BMI1 GTF3C2 FOXK2 NOM1 RPL36AP30 GC07P157307 DNAJB6
GH07F157335 1.1 ENCODE 10.1 -75.0 -74999 5.0 HDGF PKNOX1 ARNT WRNIP1 SIN3A ARID4B DMAP1 ZNF2 YY1 ZNF143 NOM1 RPL36AP30 LOC100506585 PIR48695 GC07P157345
GH07F156948 0.6 ENCODE 9.9 +312.9 312877 3.7 HDGF ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 KLF13 NOM1 RPL36AP30 PIR33298
GH07F157137 1.3 FANTOM5 ENCODE 4.5 +123.5 123548 4.3 HDGF PKNOX1 ARID4B SIN3A FEZF1 DMAP1 YY1 CBX5 ZNF143 ZNF207 NOM1 UBE3C RPL36AP30 GC07M157142
GH07F157254 0.2 ENCODE 0.4 +9.3 9320 0.1 CTCF NFIA ZBTB33 RAD21 RPL36AP30 GC07M157241
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL36AP30 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL36AP30 Gene

Chromosome:
7
Start:
157,263,022 bp from pter
End:
157,263,401 bp from pter
Size:
380 bases
Orientation:
Minus strand

Genomic View for RPL36AP30 Gene

Genes around RPL36AP30 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP30 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP30 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP30 Gene

Proteins for RPL36AP30 Gene

Post-translational modifications for RPL36AP30 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP30 Gene

Domains & Families for RPL36AP30 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36AP30 Gene

Function for RPL36AP30 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP30 Gene

Localization for RPL36AP30 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL36AP30 Gene

Pathways & Interactions for RPL36AP30 Gene

SuperPathways for RPL36AP30 Gene

No Data Available

Interacting Proteins for RPL36AP30 Gene

Gene Ontology (GO) - Biological Process for RPL36AP30 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36AP30 Gene

Transcripts for RPL36AP30 Gene

mRNA/cDNA for RPL36AP30 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP30 Gene

No ASD Table

Relevant External Links for RPL36AP30 Gene

GeneLoc Exon Structure for
RPL36AP30
ECgene alternative splicing isoforms for
RPL36AP30

Expression for RPL36AP30 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL36AP30 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL36AP30 Gene:

RPL36AP30
genes like me logo Genes that share expression patterns with RPL36AP30: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL36AP30 Gene

Orthologs for RPL36AP30 Gene

Evolution for RPL36AP30 Gene

ENSEMBL:
Gene Tree for RPL36AP30 (if available)
TreeFam:
Gene Tree for RPL36AP30 (if available)

No data available for Orthologs for RPL36AP30 Gene

Paralogs for RPL36AP30 Gene

No data available for Paralogs for RPL36AP30 Gene

Variants for RPL36AP30 Gene

Relevant External Links for RPL36AP30 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP30

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP30 Gene

Disorders for RPL36AP30 Gene

Relevant External Links for RPL36AP30

Genetic Association Database (GAD)
RPL36AP30

No disorders were found for RPL36AP30 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL36AP30 Gene

Publications for RPL36AP30 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association studies in an isolated founder population from the Pacific Island of Kosrae. (PMID: 19197348) Lowe J.K. … Friedman J.M. (PLoS Genet. 2009) 46 64

Products for RPL36AP30 Gene

Sources for RPL36AP30 Gene

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