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Aliases for RPL36AP29 Gene

Subcategory (RNA class) for RPL36AP29 Gene

antisense

Aliases for RPL36AP29 Gene

  • Ribosomal Protein L36a Pseudogene 29 2 3 5
  • RPL36A_11_788 3

External Ids for RPL36AP29 Gene

ORGUL Members for RPL36AP29 Gene

Previous GeneCards Identifiers for RPL36AP29 Gene

  • GC07U902590

Summaries for RPL36AP29 Gene

GeneCards Summary for RPL36AP29 Gene

RPL36AP29 (Ribosomal Protein L36a Pseudogene 29) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36AP29 Gene

Genomics for RPL36AP29 Gene

Regulatory Elements for RPL36AP29 Gene

Enhancers for RPL36AP29 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G016266 1.3 ENCODE dbSUPER 8.1 +59.3 59275 3.6 HDGF PKNOX1 CREB3L1 ARNT ZNF766 CBX5 FOS ZNF592 MEF2D SMARCA4 RPL36AP29 GC07P016267 GC07M016323
GH07G016128 0.8 Ensembl ENCODE 6.2 -79.1 -79105 2.8 PKNOX1 FOXA2 JUND CEBPB CEBPG ZBTB40 TCF7L2 RPL36AP29 GC07M015956
GH07G016061 0.8 Ensembl ENCODE 6.1 -145.9 -145870 3.1 GATA2 SMARCA4 JUN FOS ATF2 RPL36AP29 GC07M015956
GH07G016066 0.9 Ensembl ENCODE 5 -141.9 -141932 1.1 CBX3 ARNT DDX20 MAX FEZF1 ZEB2 RAD21 JUND ZNF512 HNF4A RPL36AP29 GC07M015956
GH07G016273 0.5 dbSUPER 6.7 +64.6 64636 1.0 CBX3 ZBTB33 CHAMP1 SETDB1 SUPT5H RPL36AP29 GC07P016267 GC07M016323
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL36AP29 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL36AP29 Gene

Chromosome:
7
Start:
16,208,945 bp from pter
End:
16,209,268 bp from pter
Size:
324 bases
Orientation:
Plus strand

Genomic View for RPL36AP29 Gene

Genes around RPL36AP29 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP29 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP29 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP29 Gene

Proteins for RPL36AP29 Gene

Post-translational modifications for RPL36AP29 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP29 Gene

Domains & Families for RPL36AP29 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36AP29 Gene

Function for RPL36AP29 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP29 Gene

Localization for RPL36AP29 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL36AP29 Gene

Pathways & Interactions for RPL36AP29 Gene

SuperPathways for RPL36AP29 Gene

No Data Available

Interacting Proteins for RPL36AP29 Gene

Gene Ontology (GO) - Biological Process for RPL36AP29 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36AP29 Gene

Transcripts for RPL36AP29 Gene

mRNA/cDNA for RPL36AP29 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP29 Gene

No ASD Table

Relevant External Links for RPL36AP29 Gene

GeneLoc Exon Structure for
RPL36AP29
ECgene alternative splicing isoforms for
RPL36AP29

Expression for RPL36AP29 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL36AP29 Gene

mRNA differential expression in normal tissues according to GTEx for RPL36AP29 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x5.6).

NURSA nuclear receptor signaling pathways regulating expression of RPL36AP29 Gene:

RPL36AP29
genes like me logo Genes that share expression patterns with RPL36AP29: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36AP29 Gene

Orthologs for RPL36AP29 Gene

Evolution for RPL36AP29 Gene

ENSEMBL:
Gene Tree for RPL36AP29 (if available)
TreeFam:
Gene Tree for RPL36AP29 (if available)

No data available for Orthologs for RPL36AP29 Gene

Paralogs for RPL36AP29 Gene

No data available for Paralogs for RPL36AP29 Gene

Variants for RPL36AP29 Gene

Relevant External Links for RPL36AP29 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP29

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP29 Gene

Disorders for RPL36AP29 Gene

Relevant External Links for RPL36AP29

Genetic Association Database (GAD)
RPL36AP29

No disorders were found for RPL36AP29 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL36AP29 Gene

Publications for RPL36AP29 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association of lipid-lowering response to statins in combined study populations. (PMID: 20339536) Barber M.J. … Krauss R.M. (PLoS ONE 2010) 46 64
  3. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan R.S. … Benjamin E.J. (BMC Med. Genet. 2007) 46 64
  4. Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk J.B. … O'Connor G.T. (BMC Med. Genet. 2007) 46 64

Products for RPL36AP29 Gene

Sources for RPL36AP29 Gene

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