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Aliases for RPL36AP28 Gene

Aliases for RPL36AP28 Gene

  • Ribosomal Protein L36a Pseudogene 28 2 3
  • RPL36A_10_864 3
  • AC104843.3 5

External Ids for RPL36AP28 Gene

Previous GeneCards Identifiers for RPL36AP28 Gene

  • GC07U902612
  • GC07M152300

Summaries for RPL36AP28 Gene

GeneCards Summary for RPL36AP28 Gene

RPL36AP28 (Ribosomal Protein L36a Pseudogene 28) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36AP28 Gene

Genomics for RPL36AP28 Gene

Regulatory Elements for RPL36AP28 Gene

Enhancers for RPL36AP28 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F152709 1.3 FANTOM5 ENCODE 10.6 -108.1 -108050 2.7 ATF1 ARID4B FEZF1 GLI4 DMAP1 ZNF2 ZNF121 GLIS2 FOS SP3 XRCC2 ENSG00000212590 RPL36AP28 RNA5SP250 PIR31827
GH07F152574 1 Ensembl ENCODE 12.8 +27.0 26970 3.2 PKNOX1 CBX3 FEZF1 ZIC2 RELA ZNF121 E2F1 GATA3 CTBP1 FOS RPL36AP28 ENSG00000212590 GC07M152591 GC07P152545
GH07F152663 1.1 Ensembl ENCODE 10.7 -61.6 -61625 2.1 SOX13 ELF3 TFAP4 PKNOX1 ZNF384 ZNF644 RARA TEAD3 ZNF121 GATA3 ENSG00000212590 RPL36AP28 RNA5SP250 XRCC2 GC07P152660
GH07F152335 0.9 Ensembl ENCODE 11.3 +266.4 266392 2.2 HDGF CTCF ZNF654 TRIM22 ZNF2 RAD21 GATA3 GATA2 SMC3 ZNF143 XRCC2 RNA5SP250 RPL36AP28 ENSG00000212590 LINC01003 GC07M152340 GC07M152275
GH07F152554 0.7 ENCODE 11.5 +48.7 48706 0.3 CTCF SMARCA5 HDGF STAT1 ARNT ZBTB2 L3MBTL2 ZNF740 TEAD4 ZNF316 RNA5SP250 RPL36AP28 ENSG00000212590 GC07P152545 GC07M152591
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL36AP28 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL36AP28 Gene

Chromosome:
7
Start:
152,602,154 bp from pter
End:
152,602,892 bp from pter
Size:
739 bases
Orientation:
Minus strand

Genomic View for RPL36AP28 Gene

Genes around RPL36AP28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP28 Gene

Proteins for RPL36AP28 Gene

Post-translational modifications for RPL36AP28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP28 Gene

Domains & Families for RPL36AP28 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36AP28 Gene

Function for RPL36AP28 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP28 Gene

Localization for RPL36AP28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL36AP28 Gene

Pathways & Interactions for RPL36AP28 Gene

SuperPathways for RPL36AP28 Gene

No Data Available

Interacting Proteins for RPL36AP28 Gene

Gene Ontology (GO) - Biological Process for RPL36AP28 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36AP28 Gene

Transcripts for RPL36AP28 Gene

mRNA/cDNA for RPL36AP28 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP28 Gene

No ASD Table

Relevant External Links for RPL36AP28 Gene

GeneLoc Exon Structure for
RPL36AP28
ECgene alternative splicing isoforms for
RPL36AP28

Expression for RPL36AP28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL36AP28 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL36AP28 Gene:

RPL36AP28
genes like me logo Genes that share expression patterns with RPL36AP28: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL36AP28 Gene

Orthologs for RPL36AP28 Gene

Evolution for RPL36AP28 Gene

ENSEMBL:
Gene Tree for RPL36AP28 (if available)
TreeFam:
Gene Tree for RPL36AP28 (if available)

No data available for Orthologs for RPL36AP28 Gene

Paralogs for RPL36AP28 Gene

No data available for Paralogs for RPL36AP28 Gene

Variants for RPL36AP28 Gene

Relevant External Links for RPL36AP28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP28 Gene

Disorders for RPL36AP28 Gene

No disorders were found for RPL36AP28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL36AP28 Gene

Publications for RPL36AP28 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL36AP28 Gene

Sources for RPL36AP28 Gene

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