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Aliases for RPL36AP25 Gene

Aliases for RPL36AP25 Gene

  • Ribosomal Protein L36a Pseudogene 25 2 3
  • RPL36A_7_666 3
  • AL035090.1 5

External Ids for RPL36AP25 Gene

Previous GeneCards Identifiers for RPL36AP25 Gene

  • GC06U901610

Summaries for RPL36AP25 Gene

GeneCards Summary for RPL36AP25 Gene

RPL36AP25 (Ribosomal Protein L36a Pseudogene 25) is a Pseudogene.

Additional gene information for RPL36AP25 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL36AP25 Gene

Genomics for RPL36AP25 Gene

Regulatory Elements for RPL36AP25 Gene

Enhancers for RPL36AP25 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H020685 0.8 dbSUPER 0.3 +34.5 34497 7 ZNF143 ATF7 RUNX3 IKZF2 CREM SMARCA5 ZNF362 ZNF680 REST PRDM6 RPL36AP25 LOC105374968
GH06H020659 1.1 Ensembl ENCODE 0.2 +62.3 62251 3 PKNOX1 FEZF1 CEBPG ZNF2 ZFHX2 CTBP1 ZSCAN5C SCRT2 ZNF600 SCRT1 LOC105374968 RPL36AP25
GH06H020631 1 ENCODE 0.2 +92.5 92521 0 FOXA2 ATF1 ARID4B FEZF1 SLC30A9 FOS ATF7 SP5 ZHX2 JUNB LOC105374968 RPL36AP25
GH06H020696 0.6 ENCODE dbSUPER 0.3 +26.8 26791 0 FEZF1 RPL36AP25 LOC105374968
GH06H020629 0.8 ENCODE 0.2 +93.4 93401 1 ELF3 ATF1 ZNF792 FEZF1 DNMT3B ZSCAN9 SLC30A9 FOS ATF7 CREM LOC105374968 RPL36AP25
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL36AP25 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL36AP25 Gene

Chromosome:
6
Start:
20,722,328 bp from pter
End:
20,723,655 bp from pter
Size:
1,328 bases
Orientation:
Minus strand

Genomic View for RPL36AP25 Gene

Genes around RPL36AP25 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL36AP25 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL36AP25 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL36AP25 Gene

Proteins for RPL36AP25 Gene

Post-translational modifications for RPL36AP25 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL36AP25 Gene

Domains & Families for RPL36AP25 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL36AP25 Gene

Function for RPL36AP25 Gene

Phenotypes From GWAS Catalog for RPL36AP25 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL36AP25
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL36AP25 Gene

Localization for RPL36AP25 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL36AP25 Gene

Pathways & Interactions for RPL36AP25 Gene

SuperPathways for RPL36AP25 Gene

No Data Available

Interacting Proteins for RPL36AP25 Gene

Gene Ontology (GO) - Biological Process for RPL36AP25 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL36AP25 Gene

Drugs & Compounds for RPL36AP25 Gene

No Compound Related Data Available

Transcripts for RPL36AP25 Gene

mRNA/cDNA for RPL36AP25 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL36AP25
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL36AP25 Gene

No ASD Table

Relevant External Links for RPL36AP25 Gene

GeneLoc Exon Structure for
RPL36AP25
ECgene alternative splicing isoforms for
RPL36AP25

Expression for RPL36AP25 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL36AP25 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL36AP25 Gene:

RPL36AP25
genes like me logo Genes that share expression patterns with RPL36AP25: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL36AP25 Gene

Orthologs for RPL36AP25 Gene

Evolution for RPL36AP25 Gene

ENSEMBL:
Gene Tree for RPL36AP25 (if available)
TreeFam:
Gene Tree for RPL36AP25 (if available)

No data available for Orthologs for RPL36AP25 Gene

Paralogs for RPL36AP25 Gene

No data available for Paralogs for RPL36AP25 Gene

Variants for RPL36AP25 Gene

Relevant External Links for RPL36AP25 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL36AP25

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL36AP25 Gene

Disorders for RPL36AP25 Gene

Relevant External Links for RPL36AP25

Genetic Association Database (GAD)
RPL36AP25

No disorders were found for RPL36AP25 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL36AP25 Gene

Publications for RPL36AP25 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. Genome-wide association study using extreme truncate selection identifies novel genes affecting bone mineral density and fracture risk. (PMID: 21533022) Duncan EL … Brown MA (PLoS genetics 2011) 45 60

Products for RPL36AP25 Gene

Sources for RPL36AP25 Gene

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